RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 TMEM108Q6UXF1 575 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 SSX6Q7RTT6 188 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 ADGRF3Q8IZF5 1079 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 RHCGQ9UBD6 479 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 PLPP1O14494 284 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 SLC16A7O60669 478 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 PITPNBP48739 271 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 PHTF2Q8N3S3 785 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 OR1L3Q8NH93 324 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 SORBS1Q9BX66 1292 aaKnown RBP12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 NMNAT1Q9HAN9 279 aaPredicted RBP12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 PRMT8Q9NR22 394 aaPredicted RBP12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 MED11Q9P086 117 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 DNPH1O43598 174 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 ATP1B1P05026 303 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 CD36P16671 472 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 TIGD3Q6B0B8 471 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 FRMPD2BQ6IN97 320 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 OGFOD3Q6PK18 319 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 FAM111BQ6SJ93 734 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 MOB3CQ70IA8 216 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 MEPCEQ7L2J0 689 aaKnown RBP12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 MUL1Q969V5 352 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 ZC3H10Q96K80 434 aaKnown RBP12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 ATG4BQ9Y4P1 393 aa12.36□□□□□ -0.43
PRPF38A-201ENST00000257181 HTR3BO95264 441 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 ACP1P24666 158 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 SLC22A25Q6T423 547 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 VRK3Q8IV63 474 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 FAM83FQ8NEG4 500 aaPredicted RBP12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 PPP1R14BQ96C90 147 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 SORCS2Q96PQ0 1159 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 OR52D1Q9H346 318 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 DPAGT1Q9H3H5 408 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 CNOT2Q9NZN8 540 aaKnown RBP12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 SPAARA0A1B0GVQ0 90 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 TMEM212A6NML5 194 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 MT-CO2P00403 227 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 CD14P08571 375 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF773Q6PK81 442 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 LRRC56Q8IYG6 542 aaPredicted RBP12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 ASCC1Q8N9N2 400 aaKnown RBP12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 DCLRE1CQ96SD1 692 aaKnown RBP12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 NUDT22Q9BRQ3 303 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 BCL2L10Q9HD36 194 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 SLC1A7O00341 560 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 MOSPD3O75425 235 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 SCAF4O95104 1147 aaKnown RBP12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 C18orf63Q68DL7 685 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 DIRC2Q96SL1 478 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 MMP25Q9NPA2 562 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 SLC5A6Q9Y289 635 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 CDHR4A6H8M9 788 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 OR6C6A6NF89 314 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 WDR1O75083 606 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 BMI1P35226 326 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 ART1P52961 327 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 RPL27P61353 136 aaKnown RBP12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 AQP6Q13520 282 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 GNMTQ14749 295 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 LPCAT3Q6P1A2 487 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 RPS27LQ71UM5 84 aaKnown RBP12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 MARCH3Q86UD3 253 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 LILRA2Q8N149 483 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 DNAJC22Q8N4W6 341 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 OR51A2Q8NGJ7 313 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 BRIX1Q8TDN6 353 aaKnown RBP12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 TREX2Q9BQ50 279 aaPredicted RBP12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 DNAJC27Q9NZQ0 273 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 COPZ2Q9P299 210 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF221Q9UK13 617 aa12.35□□□□□ -0.43
PRPF38A-201ENST00000257181 PPM1DO15297 605 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 TAPBPO15533 448 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 RBBP9O75884 186 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 FPR3P25089 353 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 LPCAT4Q643R3 524 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 WFDC8Q8IUA0 241 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 OR11G2Q8NGC1 345 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 PSMF1Q92530 271 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 RRNAD1Q96FB5 475 aaKnown RBP12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 METTL8Q9H825 291 aaKnown RBP12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 PCDHGA7Q9Y5G6 932 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 IGLV3-19P01714 112 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 FGF5P12034 268 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 GNRHRP30968 328 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 BIDP55957 195 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 TMEM163Q8TC26 289 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 INPP5KQ9BT40 448 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 TMED9Q9BVK6 235 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 WDR76Q9H967 626 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF446Q9NWS9 450 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF222Q9UK12 451 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 RNF24Q9Y225 148 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 ASB4Q9Y574 426 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 ZNF850A8MQ14 1090 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 H7C417 338 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 IFNL4K9M1U5 179 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 PLOD2O00469 737 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 SSTR4P31391 388 aa12.34□□□□□ -0.43
PRPF38A-201ENST00000257181 LIPAP38571 399 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms