RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 CTXN1P60606 82 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 C9orf50Q5SZB4 431 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 LRRC69Q6ZNQ3 347 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 COQ8AQ8NI60 647 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 SLC37A2Q8TED4 501 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 DVL3Q92997 716 aaPredicted RBP12.39□□□□□ -0.43
VHL-201ENST00000256474 PBX4Q9BYU1 374 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 FXYD6Q9H0Q3 95 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 NUBP2Q9Y5Y2 271 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 A0A0G2JK05 382 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 M0R233 179 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 SLC22A5O76082 557 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 UBL3O95164 117 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 APEHP13798 732 aaKnown RBP12.39□□□□□ -0.43
VHL-201ENST00000256474 SRMP19623 302 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 RPS15P62841 145 aaKnown RBP12.39□□□□□ -0.43
VHL-201ENST00000256474 PITPNAQ00169 270 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 CDK5R1Q15078 307 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 SMAD2Q15796 467 aaKnown RBP12.39□□□□□ -0.43
VHL-201ENST00000256474 GALNT6Q8NCL4 622 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 OR13H1Q8NG92 308 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 TSEN15Q8WW01 171 aaKnown RBP12.39□□□□□ -0.43
VHL-201ENST00000256474 PMEPA1Q969W9 287 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 BMFQ96LC9 184 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 SFXN1Q9H9B4 322 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 MED12Q93074 2177 aa12.39□□□□□ -0.43
VHL-201ENST00000256474 K7EQS6 105 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 APBB3O95704 486 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 FCARP24071 287 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 GRK6P43250 576 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 EXOSC2Q13868 293 aaKnown RBP12.38□□□□□ -0.43
VHL-201ENST00000256474 PRICKLE4Q2TBC4 344 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 FAM220AQ7Z4H9 259 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 OR51Q1Q8NH59 317 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 ZC3HAV1LQ96H79 300 aaKnown RBP12.38□□□□□ -0.43
VHL-201ENST00000256474 RANBP3Q9H6Z4 567 aaPredicted RBP12.38□□□□□ -0.43
VHL-201ENST00000256474 H0YC42 278 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 BRINP1O60477 761 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 ZFPL1O95159 310 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 CBX7O95931 251 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 SERPINA3P01011 423 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 EN2P19622 333 aaPredicted RBP12.38□□□□□ -0.43
VHL-201ENST00000256474 PER3P56645 1201 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 ALG11Q2TAA5 492 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 SMUG1Q53HV7 270 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 ZBTB37Q5TC79 503 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 TEX261Q6UWH6 196 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 OR10AC1Q8NH08 325 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 C2orf42Q9NWW7 574 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 U3KQ87 197 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 LEUTXA8MZ59 168 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 ARPC5O15511 151 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 HLA-DQB1P01920 261 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 THBS1P07996 1170 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 PSMA6P60900 246 aaKnown RBP12.38□□□□□ -0.43
VHL-201ENST00000256474 ACTC1P68032 377 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 ACTA1P68133 377 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 PSG6Q00889 435 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 TNK1Q13470 666 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 NFATC4Q14934 902 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 ALKAL2Q6UX46 152 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 NHLRC1Q6VVB1 395 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 DPY19L4Q7Z388 723 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 RNF113BQ8IZP6 322 aaKnown RBP12.38□□□□□ -0.43
VHL-201ENST00000256474 SMIM19Q96E16 107 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 DGAT2Q96PD7 388 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 CRISPLD2Q9H0B8 497 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 GHITMQ9H3K2 345 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 Q9N2J8 555 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 ZFP64Q9NPA5 681 aa12.38□□□□□ -0.43
VHL-201ENST00000256474 ATXN7L1Q9ULK2 861 aaPredicted RBP12.38□□□□□ -0.43
VHL-201ENST00000256474 C2orf74A8MZ97 194 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 ZNF879B4DU55 563 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 GPR89AB7ZAQ6 455 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 GPR89BP0CG08 455 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 NANOS3P60323 173 aaKnown RBP12.37□□□□□ -0.43
VHL-201ENST00000256474 PLAURQ03405 335 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 KIR2DS3Q14952 304 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 GRK1Q15835 563 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 PXDC1Q5TGL8 231 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 TIGD3Q6B0B8 471 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 DMKNQ6E0U4 476 aaPredicted RBP12.37□□□□□ -0.43
VHL-201ENST00000256474 OR5M10Q6IEU7 315 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 ZNF613Q6PF04 617 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 TMED4Q7Z7H5 227 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 ALG12Q9BV10 488 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 TRPV4Q9HBA0 871 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 DUSP22Q9NRW4 184 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 GLTPQ9NZD2 209 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 ASPMQ8IZT6 3477 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 FRYQ5TBA9 3013 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 KIF26AQ9ULI4 1882 aaPredicted RBP12.37□□□□□ -0.43
VHL-201ENST00000256474 ASXL3Q9C0F0 2248 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 A0A0B4J2E0 115 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 A0A1B0GX12 115 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 TCRBV21S2A2A0A5A6 115 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 PLRG1O43660 514 aaKnown RBP12.37□□□□□ -0.43
VHL-201ENST00000256474 SPI1P17947 270 aa12.37□□□□□ -0.43
VHL-201ENST00000256474 MAZP56270 477 aaKnown RBP12.37□□□□□ -0.43
VHL-201ENST00000256474 FOXL2P58012 376 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms