RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 CAV2P51636 162 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 FOXK2Q01167 660 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 SMN1Q16637 294 aaKnown RBP17.56■□□□□ 0.4
PTPRE-201ENST00000254667 CYP4V2Q6ZWL3 525 aaPredicted RBP17.56■□□□□ 0.4
PTPRE-201ENST00000254667 UCN3Q969E3 161 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 TWSG1Q9GZX9 223 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 TBC1D29Q9UFV1 150 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 C7orf72A4D263 438 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 SLC16A6O15403 523 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 MPPED1O15442 326 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 CD1CP29017 333 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 SSTR4P31391 388 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 EIF2S3LQ2VIR3 472 aaKnown RBP17.56■□□□□ 0.4
PTPRE-201ENST00000254667 SERPINA12Q8IW75 414 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 SULF2Q8IWU5 870 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 SLC25A43Q8WUT9 341 aaPredicted RBP17.56■□□□□ 0.4
PTPRE-201ENST00000254667 BCL7CQ8WUZ0 217 aaPredicted RBP17.56■□□□□ 0.4
PTPRE-201ENST00000254667 PLEKHA3Q9HB20 300 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 PRAMEF25A6NGN4 478 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 CD14P08571 375 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 OR8G3PP0DMU2 310 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 TAS2R46P59540 309 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 CXADRP78310 365 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 SLC35D3Q5M8T2 416 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 ZNF684Q5T5D7 378 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 OR2G6Q5TZ20 316 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 OR6F1Q8NGZ6 308 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 OR5B12Q96R08 314 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 LHX6Q9UPM6 363 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 LSM5Q9Y4Y9 91 aaKnown RBP17.56■□□□□ 0.4
PTPRE-201ENST00000254667 MYO18AQ92614 2054 aaKnown RBP17.56■□□□□ 0.4
PTPRE-201ENST00000254667 LOC105369274A0A096LPK9 316 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 OR4N4Q8N0Y3 316 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 OR4K15Q8NH41 348 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 PHYHIPQ92561 330 aa17.56■□□□□ 0.4
PTPRE-201ENST00000254667 CD300LBA8K4G0 201 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 GM2AP17900 193 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 PLGLAQ15195 96 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 GPR19Q15760 415 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 C6orf183Q5T699 404 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 GPR157Q5UAW9 335 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 TBPL2Q6SJ96 375 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 PRR18Q8N4B5 295 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 DCUN1D4Q92564 292 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 DYNLRB1Q9NP97 96 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 TMEM72A0PK05 275 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 HMX2A2RU54 273 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 GLSO94925 669 aaPredicted RBP17.55■□□□□ 0.4
PTPRE-201ENST00000254667 SCG5P05408 212 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 SERPINA2P20848 420 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 CARD18P57730 90 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 OR56B1Q8NGI3 324 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 MAFIPQ8WZ33 124 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 MAOAP21397 527 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 TNFSF8P32971 234 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 SEC61A1P61619 476 aaKnown RBP17.55■□□□□ 0.4
PTPRE-201ENST00000254667 ZNF836Q6ZNA1 936 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 ZNF610Q8N9Z0 462 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 FOXN4Q96NZ1 517 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 NRIP3Q9NQ35 241 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 C19orf53Q9UNZ5 99 aaPredicted RBP17.55■□□□□ 0.4
PTPRE-201ENST00000254667 TP53TG5Q9Y2B4 290 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 FUOMA2VDF0 154 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 ZNF705EA8MWA4 302 aaPredicted RBP17.55■□□□□ 0.4
PTPRE-201ENST00000254667 Q6ZPB1 254 aaPredicted RBP17.55■□□□□ 0.4
PTPRE-201ENST00000254667 OR6T1Q8NGN1 323 aa17.55■□□□□ 0.4
PTPRE-201ENST00000254667 TUBG1P23258 451 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 EXOSC6Q5RKV6 272 aaKnown RBP17.54■□□□□ 0.4
PTPRE-201ENST00000254667 SLX4IPQ5VYV7 408 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 GLB1L2Q8IW92 636 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 SLC16A11Q8NCK7 471 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 PBX4Q9BYU1 374 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 ZNF286AQ9HBT8 521 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 LAMA4Q16363 1823 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 BDKRB2P30411 391 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 Q499Y3 187 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 DESI1Q6ICB0 168 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 GRINAQ7Z429 371 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 AMBRA1Q9C0C7 1298 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 NDUFAF4Q9P032 175 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 SAXO2Q658L1 398 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 HBMQ6B0K9 141 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 PSMF1Q92530 271 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 OR51B6Q9H340 312 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 ZNF223Q9UK11 482 aaPredicted RBP17.54■□□□□ 0.4
PTPRE-201ENST00000254667 PCDHB10Q9UN67 800 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 BIDP55957 195 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 MFAP5Q13361 173 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 NCCRP1Q6ZVX7 275 aaPredicted RBP17.54■□□□□ 0.4
PTPRE-201ENST00000254667 TMEM255BQ8WV15 326 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 TMEM30AQ9NV96 361 aa17.54■□□□□ 0.4
PTPRE-201ENST00000254667 ARHGAP33O14559 1287 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 MTNR1BP49286 362 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 CYB561P49447 251 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 PGFP49763 221 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 IL13RA1P78552 427 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 NKAIN1Q4KMZ8 207 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 DHRS4L2Q6PKH6 230 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 LILRA2Q8N149 483 aa17.53■□□□□ 0.4
PTPRE-201ENST00000254667 WBP2Q969T9 261 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms