RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 MANSC1Q9H8J5 431 aa9□□□□□ -0.97
VPS50-201ENST00000251739 MTHFD2LQ9H903 347 aaPredicted RBP9□□□□□ -0.97
VPS50-201ENST00000251739 FKRPQ9H9S5 495 aa9□□□□□ -0.97
VPS50-201ENST00000251739 SLC6A13Q9NSD5 602 aa9□□□□□ -0.97
VPS50-201ENST00000251739 CHST2Q9Y4C5 530 aa9□□□□□ -0.97
VPS50-201ENST00000251739 GPR45Q9Y5Y3 372 aa9□□□□□ -0.97
VPS50-201ENST00000251739 PHF1O43189 567 aaPredicted RBP8.99□□□□□ -0.97
VPS50-201ENST00000251739 FRS3O43559 492 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 LY6HO94772 140 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 GPIP06744 558 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 ZNF16P17020 682 aaPredicted RBP8.99□□□□□ -0.97
VPS50-201ENST00000251739 BGNP21810 368 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 APOBEC3AP31941 199 aaPredicted RBP8.99□□□□□ -0.97
VPS50-201ENST00000251739 LRRC74AQ0VAA2 488 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 BST1Q10588 318 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 GSTA3Q16772 222 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 HIKESHIQ53FT3 197 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 OTUD3Q5T2D3 398 aaPredicted RBP8.99□□□□□ -0.97
VPS50-201ENST00000251739 RNF220Q5VTB9 566 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 ZNF836Q6ZNA1 936 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 ZNF440Q8IYI8 595 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 TRIML2Q8N7C3 387 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 POMGNT2Q8NAT1 580 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 TMEM158Q8WZ71 300 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 PANX1Q96RD7 426 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 NELFAQ9H3P2 528 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 OBP2BQ9NPH6 170 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 PNPOQ9NVS9 261 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 RLIMQ9NVW2 624 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 UPB1Q9UBR1 384 aa8.99□□□□□ -0.97
VPS50-201ENST00000251739 IGHV1-18A0A0C4DH31 117 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 FTCDNL1E5RQL4 147 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 SNNO75324 88 aaPredicted RBP8.98□□□□□ -0.97
VPS50-201ENST00000251739 AKR7A3O95154 331 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 GSNP06396 782 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 TFPTP0C1Z6 253 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 ZCCHC18P0CG32 403 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 PRG2P13727 222 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 UQCRBP14927 111 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 IL7RP16871 459 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 USF1P22415 310 aaPredicted RBP8.98□□□□□ -0.97
VPS50-201ENST00000251739 THBS2P35442 1172 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 ANXA11P50995 505 aaKnown RBP8.98□□□□□ -0.97
VPS50-201ENST00000251739 NME5P56597 212 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 PRPS1P60891 318 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 CHRNB3Q05901 458 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 LGALS3BPQ08380 585 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 CEACAM7Q14002 265 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 GNA13Q14344 377 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 LINGO2Q7L985 606 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 AAED1Q7RTV5 226 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 SPATA19Q7Z5L4 167 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 VRK2Q86Y07 508 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 EPHX4Q8IUS5 362 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 GLB1L3Q8NCI6 653 aaPredicted RBP8.98□□□□□ -0.97
VPS50-201ENST00000251739 OR1K1Q8NGR3 316 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 PNPT1Q8TCS8 783 aaKnown RBP8.98□□□□□ -0.97
VPS50-201ENST00000251739 BCL2L2Q92843 193 aaPredicted RBP8.98□□□□□ -0.97
VPS50-201ENST00000251739 SORCS2Q96PQ0 1159 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 OR52E6Q96RD3 313 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 CRNNQ9UBG3 495 aaPredicted RBP8.98□□□□□ -0.97
VPS50-201ENST00000251739 MOKQ9UQ07 419 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 ATP23Q9Y6H3 246 aa8.98□□□□□ -0.97
VPS50-201ENST00000251739 A0A096LPI6 279 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 ARPC4-TTLL3A0A0A6YYG9 625 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 A8MVM7 634 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 J3QW42 95 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 NDUFS8O00217 210 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 HDAC3O15379 428 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 RGS16O15492 202 aaPredicted RBP8.97□□□□□ -0.97
VPS50-201ENST00000251739 PDE5AO76074 875 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 ZNF432O94892 652 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 VAMP5O95183 116 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 KRT75O95678 551 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 WNT11O96014 354 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 IGLV1-44P01699 117 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 GKN3PP0CG01 181 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 NR2F1P10589 423 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 HOXB9P17482 250 aaPredicted RBP8.97□□□□□ -0.97
VPS50-201ENST00000251739 IGFBP5P24593 272 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 EPHA3P29320 983 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 SELENOPP49908 381 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 BNIP2Q12982 314 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 STX3Q13277 289 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 OR7A5Q15622 319 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 KRTAP24-1Q3LI83 254 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 C3orf36Q3SXR2 165 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 TBRG1Q3YBR2 411 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 LIN52Q52LA3 116 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 C1orf140Q5VVS0 124 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 CYB5R2Q6BCY4 276 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 WBP2NLQ6ICG8 309 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 ZNF621Q6ZSS3 439 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 C8orf86Q6ZUL3 223 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 CREB3L2Q70SY1 520 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 PEX5LQ8IYB4 626 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 CLIP4Q8N3C7 705 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 FAM169BQ8N8A8 192 aa8.97□□□□□ -0.97
VPS50-201ENST00000251739 MAGEE2Q8TD90 523 aaPredicted RBP8.97□□□□□ -0.97
VPS50-201ENST00000251739 SLC38A5Q8WUX1 472 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms