RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 CLUP10909 449 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 SLC2A5P22732 501 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 TSFMP43897 325 aaKnown RBP15.58■□□□□ 0.08
FOXA1-201ENST00000250448 CENPAP49450 140 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 GFERP55789 205 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 GPR68Q15743 365 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 GRK1Q15835 563 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 DUSP5Q16690 384 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 RTL4Q6ZR62 310 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 BAHD1Q8TBE0 780 aaPredicted RBP15.58■□□□□ 0.08
FOXA1-201ENST00000250448 MAP3K3Q99759 626 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 ACTR6Q9GZN1 396 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 TWSG1Q9GZX9 223 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 BEX1Q9HBH7 125 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 SLC35A3Q9Y2D2 325 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 NPTNQ9Y639 398 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 LYPD3O95274 346 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 THBS1P07996 1170 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 SLC35G6P0C7Q6 338 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 EPXP11678 715 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 CAPZA2P47755 286 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 CRYZQ08257 329 aaKnown RBP15.58■□□□□ 0.08
FOXA1-201ENST00000250448 DUSP8Q13202 625 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 DYRK1AQ13627 763 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 OR1Q1Q15612 314 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.58■□□□□ 0.08
FOXA1-201ENST00000250448 HDDC2Q7Z4H3 204 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 SYT9Q86SS6 491 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 LRRC25Q8N386 305 aaPredicted RBP15.58■□□□□ 0.08
FOXA1-201ENST00000250448 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.58■□□□□ 0.08
FOXA1-201ENST00000250448 COL26A1Q96A83 441 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 PEX11GQ96HA9 241 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 C10orf90Q96M02 699 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 RBP7Q96R05 134 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 C20orf85Q9H1P6 137 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 AUNIPQ9H7T9 357 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 NTMQ9P121 344 aa15.58■□□□□ 0.08
FOXA1-201ENST00000250448 LMO7DNF2Z398 122 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 FLRT2O43155 660 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 B2MP61769 119 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 ACTC1P68032 377 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 ACTA1P68133 377 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 PUDPQ08623 228 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 SNTB2Q13425 540 aaKnown RBP15.57■□□□□ 0.08
FOXA1-201ENST00000250448 CRMP1Q14194 572 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 MAPK14Q16539 360 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 SSX6Q7RTT6 188 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 SLC25A45Q8N413 288 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 SMIM4Q8WVI0 70 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 RADILQ96JH8 1075 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 ZNF436Q9C0F3 470 aaPredicted RBP15.57■□□□□ 0.08
FOXA1-201ENST00000250448 EMC3Q9P0I2 261 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 SIGLEC7Q9Y286 467 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 ENTPD2Q9Y5L3 495 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 A0A1W2PPK0 400 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 STX11O75558 287 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 SERPINA3P01011 423 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 DRD5P21918 477 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 MTFR2Q6P444 385 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 TMEM65Q6PI78 240 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 CYB561A3Q8NBI2 242 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 OR2T35Q8NGX2 323 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 TGM7Q96PF1 710 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 SDF2Q99470 211 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 TTTY10Q9BZA0 68 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 POMT2Q9UKY4 750 aa15.57■□□□□ 0.08
FOXA1-201ENST00000250448 G3V3Q6 166 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 HPXP02790 462 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 GDNFP39905 211 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 LYSMD4Q5XG99 296 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 NLRC3Q7RTR2 1065 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 PRSS45Q7RTY3 260 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 IZUMO1Q8IYV9 350 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 DOK4Q8TEW6 326 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 PMEPA1Q969W9 287 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 BPIFA2Q96DR5 249 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 CDCP1Q9H5V8 836 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 ZNF275Q9NSD4 429 aaPredicted RBP15.56■□□□□ 0.08
FOXA1-201ENST00000250448 FBXL4Q9UKA2 621 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 CTDSPLO15194 276 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 CFDP00746 253 aaPredicted RBP15.56■□□□□ 0.08
FOXA1-201ENST00000250448 PROS1P07225 676 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 ZNF3P17036 446 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 NT5EP21589 574 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 LCN1P31025 176 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 SELENOPP49908 381 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 SIGLEC14Q08ET2 396 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 MFSD13AQ14CX5 517 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 ZSWIM7Q19AV6 140 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 MRPL2Q5T653 305 aaKnown RBP15.56■□□□□ 0.08
FOXA1-201ENST00000250448 TMPRSS11FQ6ZWK6 438 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 CDH24Q86UP0 819 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 SLITRK4Q8IW52 837 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 OR4N5Q8IXE1 308 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 MAML2Q8IZL2 1156 aaPredicted RBP15.56■□□□□ 0.08
FOXA1-201ENST00000250448 CDK20Q8IZL9 346 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 RFLNBQ8N5W9 214 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 ZNF527Q8NB42 609 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 OR5T3Q8NGG3 340 aa15.56■□□□□ 0.08
FOXA1-201ENST00000250448 LGALS14Q8TCE9 139 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms