RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 FZD2Q14332 565 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 ZNF550Q7Z398 422 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 ZDHHC1Q8WTX9 485 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 MMABQ96EY8 250 aaPredicted RBP23.36■■□□□ 1.33
RAB40C-201ENST00000248139 SCMH1Q96GD3 660 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 POMT2Q9UKY4 750 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 WDR87Q6ZQQ6 2873 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 UBL3O95164 117 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 UCHL1P09936 223 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 RNH1P13489 461 aaKnown RBP23.36■■□□□ 1.33
RAB40C-201ENST00000248139 BTG1P62324 171 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 ODF4Q2M2E3 257 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 TMEM255AQ5JRV8 349 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 C9orf62Q8N4C0 152 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 OR14A16Q8NHC5 309 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 MRPL38Q96DV4 380 aaKnown RBP23.36■■□□□ 1.33
RAB40C-201ENST00000248139 OR10A5Q9H207 317 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 SRA1Q9HD15 236 aaKnown RBP23.36■■□□□ 1.33
RAB40C-201ENST00000248139 KLHDC2Q9Y2U9 406 aa23.36■■□□□ 1.33
RAB40C-201ENST00000248139 IGKV1D-42A0A075B6H8 117 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 ZNF141Q15928 474 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 MANEAQ5SRI9 462 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 Q6ZS52 159 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 TOE1Q96GM8 510 aaKnown RBP23.35■■□□□ 1.33
RAB40C-201ENST00000248139 TEKT2Q9UIF3 430 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 MGAT4AQ9UM21 535 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 TMA7Q9Y2S6 64 aaKnown RBP23.35■■□□□ 1.33
RAB40C-201ENST00000248139 TRAV1-2A0A0B4J238 106 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 ZFPL1O95159 310 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 GPANK1O95872 356 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 OR8G3PP0DMU2 310 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 SRMP19623 302 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 GPR3P46089 330 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 POMZP3Q6PJE2 187 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 LINGO2Q7L985 606 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 OR6C4Q8NGE1 309 aa23.35■■□□□ 1.33
RAB40C-201ENST00000248139 RGP1Q92546 391 aaPredicted RBP23.35■■□□□ 1.33
RAB40C-201ENST00000248139 PCDH15Q96QU1 1955 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 TRABD2BA6NFA1 517 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 DCTN6O00399 190 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 GMDSO60547 372 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 ARL6IP5O75915 188 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 SOX2P48431 317 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 ACTA2P62736 377 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 ACTG2P63267 376 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 ST3GAL2Q16842 350 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 TMEM184AQ6ZMB5 413 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 OR51J1Q9H342 316 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 CDCP1Q9H5V8 836 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 NRIP3Q9NQ35 241 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 KIR2DS5A0A0G2JLQ3 304 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 A0A0G2JNG1 304 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 TVP23AA6NH52 213 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 KIR2DS3K7RE56 304 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 NDUFB5O43674 189 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 CTNSO60931 367 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 SERPINA3P01011 423 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 STOMP27105 288 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 RABIFP47224 123 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 RPS15P62841 145 aaKnown RBP23.34■■□□□ 1.33
RAB40C-201ENST00000248139 KIR2DS5Q14953 304 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 RPL22L1Q6P5R6 122 aaKnown RBP23.34■■□□□ 1.33
RAB40C-201ENST00000248139 APOOLQ6UXV4 268 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 FCRLAQ7L513 359 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 PRR22Q8IZ63 422 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 TEX19Q8NA77 164 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 HAVCR2Q8TDQ0 301 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 DDOQ99489 341 aa23.34■■□□□ 1.33
RAB40C-201ENST00000248139 SPTY2D1-AS1A0A0U1RR47 76 aa23.33■■□□□ 1.33
RAB40C-201ENST00000248139 TMEM72A0PK05 275 aa23.33■■□□□ 1.33
RAB40C-201ENST00000248139 MMP15P51511 669 aa23.33■■□□□ 1.33
RAB40C-201ENST00000248139 GPR143P51810 404 aa23.33■■□□□ 1.33
RAB40C-201ENST00000248139 GNG2P59768 71 aa23.33■■□□□ 1.33
RAB40C-201ENST00000248139 SNTB2Q13425 540 aaKnown RBP23.33■■□□□ 1.33
RAB40C-201ENST00000248139 ZSWIM7Q19AV6 140 aa23.33■■□□□ 1.33
RAB40C-201ENST00000248139 FAAP20Q6NZ36 180 aa23.33■■□□□ 1.33
RAB40C-201ENST00000248139 KANSL1Q7Z3B3 1105 aa23.33■■□□□ 1.33
RAB40C-201ENST00000248139 DNAAF1Q8NEP3 725 aa23.33■■□□□ 1.33
RAB40C-201ENST00000248139 ELF4Q99607 663 aaPredicted RBP23.33■■□□□ 1.33
RAB40C-201ENST00000248139 ZFP64Q9NPA5 681 aa23.33■■□□□ 1.33
RAB40C-201ENST00000248139 GDNFP39905 211 aa23.33■■□□□ 1.32
RAB40C-201ENST00000248139 DPY19L2P2Q6ZN68 376 aa23.33■■□□□ 1.32
RAB40C-201ENST00000248139 SYS1Q8N2H4 156 aa23.33■■□□□ 1.32
RAB40C-201ENST00000248139 POMGNT2Q8NAT1 580 aa23.33■■□□□ 1.32
RAB40C-201ENST00000248139 OR8H1Q8NGG4 311 aa23.33■■□□□ 1.32
RAB40C-201ENST00000248139 PHOSPHO1Q8TCT1 267 aa23.33■■□□□ 1.32
RAB40C-201ENST00000248139 GIMAP1Q8WWP7 306 aa23.33■■□□□ 1.32
RAB40C-201ENST00000248139 PMM1Q92871 262 aa23.33■■□□□ 1.32
RAB40C-201ENST00000248139 ALG12Q9BV10 488 aa23.33■■□□□ 1.32
RAB40C-201ENST00000248139 OR7A10O76100 309 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 MED25Q71SY5 747 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 ZNF431Q8TF32 576 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-201ENST00000248139 PCNPQ8WW12 178 aaKnown RBP23.32■■□□□ 1.32
RAB40C-201ENST00000248139 FOXN4Q96NZ1 517 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 ABRACLQ9P1F3 81 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 KLK11Q9UBX7 282 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 ING1Q9UK53 422 aaPredicted RBP23.32■■□□□ 1.32
RAB40C-201ENST00000248139 SPATA2Q9UM82 520 aa23.32■■□□□ 1.32
RAB40C-201ENST00000248139 PCDHGA9Q9Y5G4 932 aaKnown RBP23.32■■□□□ 1.32
RAB40C-201ENST00000248139 PRAMEF26H0Y7S4 382 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms