RNA–Protein interactions for RNA: ENST00000244050.2

SNAI1-201, Transcript of snail family transcriptional repressor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAI1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI1-201ENST00000244050 TRAPPC2BP0DI82 140 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 HIST1H1CP16403 213 aaKnown RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 CSRP1P21291 193 aaKnown RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 FBLP22087 321 aaKnown RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 APEX1P27695 318 aaKnown RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 NRG3P56975 720 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 FOXC1Q12948 553 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 TAB1Q15750 504 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 KCNJ8Q15842 424 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 LCN1P1Q5VSP4 162 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 YOD1Q5VVQ6 348 aaPredicted RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 DMKNQ6E0U4 476 aaPredicted RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 ARL9Q6T311 187 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 PXKQ7Z7A4 578 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 SYS1Q8N2H4 156 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 MS4A15Q8N5U1 240 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 KDF1Q8NAX2 398 aaPredicted RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 C7orf57Q8NEG2 295 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 OR2T27Q8NH04 317 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 ABHD4Q8TB40 342 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 LIPHQ8WWY8 451 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 OR1F2PQ96R84 312 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 GPX7Q96SL4 187 aaPredicted RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 DDOQ99489 341 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 DPYSL5Q9BPU6 564 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 SLC7A5P2Q9GIP4 190 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 C11orf54Q9H0W9 315 aaPredicted RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 TMEM9BQ9NQ34 198 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 UBQLN4Q9NRR5 601 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 LANCL2Q9NS86 450 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 IER3IP1Q9Y5U9 82 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 WDFY3Q8IZQ1 3526 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 IGHV5-10-1A0A0J9YXX1 117 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 C17orf105B2RV13 164 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 MCIDASD6RGH6 385 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 J3QLW9 94 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 OGG1O15527 345 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 HYAL3O43820 417 aaPredicted RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 IL33O95760 270 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 CD1AP06126 327 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 SLC2A2P11168 524 aaPredicted RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 CEACAM1P13688 526 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 ZNF19P17023 458 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 PPICP45877 212 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 DIO1P49895 249 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 DUSP3P51452 185 aaPredicted RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 SLC37A1P57057 533 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 OR12D2P58182 307 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 PRPS1P60891 318 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 RPS4XP62701 263 aaKnown RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 E2F1Q01094 437 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 ACY1Q03154 408 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 LGALS3BPQ08380 585 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 NNATQ16517 81 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 NDUFAF6Q330K2 333 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 SLC35D3Q5M8T2 416 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 C1orf189Q5VU69 101 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 WBP2NLQ6ICG8 309 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 NR2C2APQ86WQ0 139 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 ZNF527Q8NB42 609 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 FAM98AQ8NCA5 519 aaKnown RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 OR4K13Q8NH42 304 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 PTPMT1Q8WUK0 201 aaPredicted RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 ITFG2Q969R8 447 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 PGLYRP3Q96LB9 341 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 CCDC74BQ96LY2 380 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 SLC46A1Q96NT5 459 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 OR6C1Q96RD1 312 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 MOV10Q9HCE1 1003 aaKnown RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 NRIP3Q9NQ35 241 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 EXOSC3Q9NQT5 275 aaKnown RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 ASCC3Q8N3C0 2202 aaKnown RBP11.59□□□□□ -0.55
SNAI1-201ENST00000244050 CACNA1GO43497 2377 aa11.59□□□□□ -0.55
SNAI1-201ENST00000244050 FAM208BQ5VWN6 2430 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 DVL2O14641 736 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 CCNKO75909 580 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 GYPBP06028 91 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 PNMTP11086 282 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 SHC1P29353 583 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 LCN1P31025 176 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 ACTA2P62736 377 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 ACTG2P63267 376 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 IL10RAQ13651 578 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 PON3Q15166 354 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 ARHGAP40Q5TG30 622 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 Q8N402 240 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 LRRC17Q8N6Y2 441 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 NPEPL1Q8NDH3 523 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 SDR9C7Q8NEX9 313 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 OR6F1Q8NGZ6 308 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 OR14A16Q8NHC5 309 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 ZC3HAV1LQ96H79 300 aaKnown RBP11.58□□□□□ -0.56
SNAI1-201ENST00000244050 CNN2Q99439 309 aaKnown RBP11.58□□□□□ -0.56
SNAI1-201ENST00000244050 TTYH2Q9BSA4 534 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 TMEM43Q9BTV4 400 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 NMNAT2Q9BZQ4 307 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 PPIL3Q9H2H8 161 aaKnown RBP11.58□□□□□ -0.56
SNAI1-201ENST00000244050 ST6GALNAC2Q9UJ37 374 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 ITGB1BP2Q9UKP3 347 aa11.58□□□□□ -0.56
SNAI1-201ENST00000244050 SRPK3Q9UPE1 567 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms