RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 TMEM196Q5HYL7 178 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 SSX6Q7RTT6 188 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 ZNF619Q8N2I2 560 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 IQCF1Q8N6M8 205 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 SLC37A2Q8TED4 501 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 KCTD12Q96CX2 325 aaKnown RBP10.18□□□□□ -0.78
COPA-201ENST00000241704 C1QTNF2Q9BXJ5 285 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 COLQQ9Y215 455 aaPredicted RBP10.18□□□□□ -0.78
COPA-201ENST00000241704 ZNF705EA8MWA4 302 aaPredicted RBP10.18□□□□□ -0.78
COPA-201ENST00000241704 MBTPS2O43462 519 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 GATBO75879 557 aaKnown RBP10.18□□□□□ -0.78
COPA-201ENST00000241704 CBX7O95931 251 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 CPEP16870 476 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 OPRD1P41143 372 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 TRAM1Q15629 374 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 OLFML2AQ68BL7 652 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 SSX9Q7RTT3 188 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 CALHM3Q86XJ0 350 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 OR6N2Q8NGY6 317 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 ASF1BQ9NVP2 202 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 RLIMQ9NVW2 624 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 SPHK1Q9NYA1 384 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 DHCR7Q9UBM7 475 aaKnown RBP10.18□□□□□ -0.78
COPA-201ENST00000241704 PLEKHM1Q9Y4G2 1056 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 RGPD3A6NKT7 1758 aaPredicted RBP10.18□□□□□ -0.78
COPA-201ENST00000241704 RGPD4Q7Z3J3 1758 aa10.18□□□□□ -0.78
COPA-201ENST00000241704 SHROOM3Q8TF72 1996 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 MEIKINA0A087WXM9 373 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 GXYLT2A0PJZ3 443 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 SC5DO75845 299 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 PTGER1P34995 402 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 RBM34P42696 430 aaKnown RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 CCR6P51684 374 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 ARFRP1Q13795 201 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 NKAIN2Q5VXU1 208 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 LAMTOR1Q6IAA8 161 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 TMEM184AQ6ZMB5 413 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 Q6ZS52 159 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 TMUB2Q71RG4 321 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 CEACAM19Q7Z692 300 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 SIAH3Q8IW03 269 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 ZNF101Q8IZC7 436 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 TM4SF18Q96CE8 201 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 FAM46AQ96IP4 442 aaKnown RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 FER1L6-AS2Q96M78 137 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 CNTNAP3BQ96NU0 1288 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 C1QTNF6Q9BXI9 259 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 MIXL1Q9H2W2 232 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 KIR3DX1Q9H7L2 352 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 THSD1Q9NS62 852 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 LAMP5Q9UJQ1 280 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 RASD1Q9Y272 281 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 VDAC3Q9Y277 283 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 CNOT1A5YKK6 2376 aaKnown RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 BLACEA4D250 179 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 FLRT2O43155 660 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 TSFMP43897 325 aaKnown RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 ERV3-1Q14264 604 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 SYPL1Q16563 259 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 LAIR1Q6GTX8 287 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 KIAA1211LQ6NV74 962 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 FIP1L1Q6UN15 594 aaKnown RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 SHFQ7M4L6 423 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 IL17RCQ8NAC3 791 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 NSMAFQ92636 917 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 ZNF707Q96C28 371 aaPredicted RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 SSX3Q99909 188 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 SLC6A5Q9Y345 797 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 TRBV11-1A0A0K0K1C0 115 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 GASTP01350 101 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 GPX2P18283 190 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 LGALSLQ3ZCW2 172 aaPredicted RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 HBMQ6B0K9 141 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 FAM71E1Q6IPT2 247 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 OVCH2Q7RTZ1 564 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 FAM122BQ7Z309 247 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 HSD17B13Q7Z5P4 300 aaPredicted RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 OR7D2Q96RA2 312 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 ADOQ96SZ5 270 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 ELF4Q99607 663 aaPredicted RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 SLC38A1Q9H2H9 487 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 SLC52A3Q9NQ40 469 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 NXT1Q9UKK6 140 aaKnown RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 AHCTF1Q8WYP5 2266 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 CDC14CA4D256 554 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 SLC22A31A6NKX4 558 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 E9PI62 339 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 F5H0A9 414 aaPredicted RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 H3BML4 177 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 ITGA5P08648 1049 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 SPARCP09486 303 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 ZNF43P17038 809 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 ELK1P19419 428 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 OR1D5P58170 312 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 TCTN1Q2MV58 587 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 ZNF791Q3KP31 576 aaPredicted RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 Q3ZCU0 254 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 ARSJQ5FYB0 599 aaPredicted RBP10.17□□□□□ -0.78
COPA-201ENST00000241704 PIP5KL1Q5T9C9 394 aa10.17□□□□□ -0.78
COPA-201ENST00000241704 ABHD17CQ6PCB6 329 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms