RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 NUP188Q5SRE5 1749 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 FOLR1P15328 257 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 AANATQ16613 207 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 CARD17Q5XLA6 110 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 FAM26EQ8N5C1 309 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 DEFB126Q9BYW3 111 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 NOX4Q9NPH5 578 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 NCDNQ9UBB6 729 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 HPNP05981 417 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 SRMP19623 302 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 POLR2IP36954 125 aaKnown RBP7.66□□□□□ -1.18
APOB-201ENST00000233242 ARRB1P49407 418 aaPredicted RBP7.66□□□□□ -1.18
APOB-201ENST00000233242 GAB1Q13480 694 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 PRSS35Q8N3Z0 413 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 TMEM106AQ96A25 262 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 SGCZQ96LD1 299 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 PEX12O00623 359 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 HOXC11O43248 304 aaPredicted RBP7.66□□□□□ -1.18
APOB-201ENST00000233242 CA12O43570 354 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 MBP02144 154 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 FBLP22087 321 aaKnown RBP7.66□□□□□ -1.18
APOB-201ENST00000233242 PTAFRP25105 342 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 ATP1B3P54709 279 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 EXOSC2Q13868 293 aaKnown RBP7.66□□□□□ -1.18
APOB-201ENST00000233242 PCK2Q16822 640 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 MEX3BQ6ZN04 569 aaKnown RBP7.66□□□□□ -1.18
APOB-201ENST00000233242 TMPPEQ6ZT21 453 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 OR1J1Q8NGS3 322 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 LYSMD1Q96S90 227 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 ACTL6BO94805 426 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 SHC2P98077 582 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 CPN1P15169 458 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 ZNF239Q16600 458 aaKnown RBP7.66□□□□□ -1.18
APOB-201ENST00000233242 EXOSC6Q5RKV6 272 aaKnown RBP7.66□□□□□ -1.18
APOB-201ENST00000233242 IL20RBQ6UXL0 311 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 ZNF534Q76KX8 674 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 GNPNAT1Q96EK6 184 aaPredicted RBP7.66□□□□□ -1.18
APOB-201ENST00000233242 ZIC5Q96T25 663 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 ALG12Q9BV10 488 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 CPEB1Q9BZB8 566 aaKnown RBP7.66□□□□□ -1.18
APOB-201ENST00000233242 ZDHHC5Q9C0B5 715 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 POFUT1Q9H488 388 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 TAF9BQ9HBM6 251 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 ZNF586Q9NXT0 402 aa7.66□□□□□ -1.18
APOB-201ENST00000233242 DDAH2O95865 285 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 F2RL1P55085 397 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 GLYR1Q49A26 553 aaPredicted RBP7.65□□□□□ -1.18
APOB-201ENST00000233242 C17orf107Q6ZR85 190 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 PIANPQ8IYJ0 282 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 TOLLIPQ9H0E2 274 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 RBPJLQ9UBG7 517 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 GPR34Q9UPC5 381 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 IGHG1P01857 330 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 KIR2DS3Q14952 304 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 SYT14P1Q58G82 188 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 ALKBH4Q9NXW9 302 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 FEZF1A0PJY2 475 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 F6UZH7 168 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 RACK1P63244 317 aaKnown RBP7.65□□□□□ -1.18
APOB-201ENST00000233242 BEX5Q5H9J7 111 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 OTUD1Q5VV17 481 aaPredicted RBP7.65□□□□□ -1.18
APOB-201ENST00000233242 ABHD12BQ7Z5M8 362 aaPredicted RBP7.65□□□□□ -1.18
APOB-201ENST00000233242 CDH26Q8IXH8 852 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 ZNF100Q8IYN0 542 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 OR1S2Q8NGQ3 325 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 NEURL2Q9BR09 285 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 DCAF7P61962 342 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 CHRNEQ04844 493 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 FAM182AQ5T1J6 154 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 CST9LP1Q5W188 147 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 CMTM3Q96MX0 182 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 CHRDQ9H2X0 955 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 LRRC37A3O60309 1634 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 SPTA1P02549 2419 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 SENP5Q96HI0 755 aaPredicted RBP7.65□□□□□ -1.18
APOB-201ENST00000233242 OR1F2PQ96R84 312 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 VPS25Q9BRG1 176 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 SRRQ9GZT4 340 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 PATZ1Q9HBE1 687 aaKnown RBP7.65□□□□□ -1.18
APOB-201ENST00000233242 PHRF1Q9P1Y6 1649 aaKnown RBP7.65□□□□□ -1.18
APOB-201ENST00000233242 DRGXA6NNA5 263 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 PIP5K1CO60331 668 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 PCBD1P61457 104 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 SDR9C7Q8NEX9 313 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 SPHK2Q9NRA0 654 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 GAR1Q9NY12 217 aaKnown RBP7.65□□□□□ -1.18
APOB-201ENST00000233242 MYEF2Q9P2K5 600 aaKnown RBP7.65□□□□□ -1.18
APOB-201ENST00000233242 RAG2P55895 527 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 PHYHD1Q5SRE7 291 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 ATPAF1Q5TC12 328 aaPredicted RBP7.65□□□□□ -1.18
APOB-201ENST00000233242 TMPRSS9Q7Z410 1059 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 ZNF439Q8NDP4 499 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 OR13C8Q8NGS7 320 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 MAP6Q96JE9 813 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 IL17FQ96PD4 163 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 RHBDD3Q9Y3P4 386 aa7.65□□□□□ -1.18
APOB-201ENST00000233242 CHRM2P08172 466 aa7.65□□□□□ -1.19
APOB-201ENST00000233242 EVX1P49640 407 aa7.65□□□□□ -1.19
APOB-201ENST00000233242 ALKBH1Q13686 389 aaKnown RBP7.65□□□□□ -1.19
APOB-201ENST00000233242 HNF4GQ14541 408 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms