RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 OR6C76A6NM76 312 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 SLC25A12O75746 678 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 LIPCP11150 499 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 BDH1Q02338 343 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 GUCA2AQ02747 115 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 CRMP1Q14194 572 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 DMKNQ6E0U4 476 aaPredicted RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 WDR88Q6ZMY6 472 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 OR13C2Q8NGS9 318 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 OR8S1Q8NH09 359 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 ACOT11Q8WXI4 607 aaPredicted RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 ADGRL4Q9HBW9 690 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 GSN-AS1Q9NRJ2 163 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 ABRACLQ9P1F3 81 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 ST6GALNAC2Q9UJ37 374 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 EYSQ5T1H1 3165 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 KIAA0100Q14667 2235 aaKnown RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 IGKV1-8A0A0C4DH67 115 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 GABARAPH6UMI1 98 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 PRICKLE3O43900 615 aaPredicted RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 SBK2P0C263 348 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 EPCAMP16422 314 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 NT5EP21589 574 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 NPBWR1P48145 328 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 TRA2BP62995 288 aaKnown RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 FAM46CQ5VWP2 391 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 CPNE2Q96FN4 548 aaPredicted RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 PAWRQ96IZ0 340 aaKnown RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 FN3KQ9H479 309 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 EMC3Q9P0I2 261 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 PCDHB10Q9UN67 800 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 TRAV14DV4A0A0A6YYC5 116 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 UBE2QL1A1L167 161 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 OTOL1A6NHN0 477 aaPredicted RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 HMSDA8MTL9 139 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 IMPA2O14732 288 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 NARSO43776 548 aaKnown RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 OR2T1O43869 369 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 NDUFB6O95139 128 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 ADH1CP00326 375 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 RPN2P04844 631 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 STAT5AP42229 794 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 ANXA11P50995 505 aaKnown RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 HTRA4P83105 476 aaPredicted RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 KCNAB1Q14722 419 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 GAB4Q2WGN9 574 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 C4orf46Q504U0 113 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 TSSK4Q6SA08 328 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 OR2W3Q7Z3T1 314 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 C12orf45Q8N5I9 185 aaPredicted RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 SUN3Q8TAQ9 357 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 CXorf40AQ8TE69 158 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 TRIM43Q96BQ3 446 aaPredicted RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 GAL3ST1Q99999 423 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 ZNF471Q9BX82 626 aaPredicted RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 SLC38A1Q9H2H9 487 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 C6orf106Q9H6K1 298 aaPredicted RBP12.95□□□□□ -0.34
SF1-201ENST00000227503 C14orf105Q9NVL8 296 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 TINAGQ9UJW2 476 aa12.95□□□□□ -0.34
SF1-201ENST00000227503 MUC22E2RYF6 1773 aaPredicted RBP12.94□□□□□ -0.34
SF1-201ENST00000227503 ANKRD20A5PA0PJZ0 165 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 LRIT2A6NDA9 550 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 MAN2B1O00754 1011 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 CCSO14618 274 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 PIN1P1O15428 100 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 TIMP1P01033 207 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 ASGR2P07307 311 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 CNR1P21554 472 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 BDKRB2P30411 391 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 P2RY2P41231 377 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 KHKP50053 298 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 NRG3P56975 720 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 RPS11P62280 158 aaKnown RBP eCLIP12.94□□□□□ -0.34
SF1-201ENST00000227503 CDK3Q00526 305 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 MRM1Q6IN84 353 aaKnown RBP12.94□□□□□ -0.34
SF1-201ENST00000227503 ZNF546Q86UE3 836 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 CCDC36Q8IYA8 594 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 RXFP4Q8TDU9 374 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 BBS4Q96RK4 519 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 SPSB2Q99619 263 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 KCNK15Q9H427 330 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 KLHL31Q9H511 634 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 NIT2Q9NQR4 276 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 RASL12Q9NYN1 266 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 GNG8Q9UK08 70 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 STX11O75558 287 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 CLEC3AO75596 197 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 FGBP02675 491 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 VIPR2P41587 438 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 PTGFRP43088 359 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 SSR2P43308 183 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 ZNF234Q14588 700 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 PCGF3Q3KNV8 242 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 RTL10Q7L3V2 364 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 TMEM17Q86X19 198 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 GID4Q8IVV7 300 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 OR4C16Q8NGL9 310 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 THAP6Q8TBB0 222 aa12.94□□□□□ -0.34
SF1-201ENST00000227503 PELI1Q96FA3 418 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms