RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 TICRRQ7Z2Z1 1910 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 CACNA1IQ9P0X4 2223 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 ARPC5O15511 151 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 FGF19O95750 216 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 AGR2O95994 175 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 ZP3P21754 424 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 AK4P27144 223 aaPredicted RBP11.37□□□□□ -0.59
NUP88-201ENST00000225696 EPHA4P54764 986 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 DHODHQ02127 395 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 EXOSC6Q5RKV6 272 aaKnown RBP11.37□□□□□ -0.59
NUP88-201ENST00000225696 RPL22L1Q6P5R6 122 aaKnown RBP11.37□□□□□ -0.59
NUP88-201ENST00000225696 USP53Q70EK8 1073 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 IQCF2Q8IXL9 164 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 MEIOBQ8N635 442 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 OR6K6Q8NGW6 343 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 FCAMRQ8WWV6 532 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 LCN9Q8WX39 176 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 RASD2Q96D21 266 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 TSSK2Q96PF2 358 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 ZNF426Q9BUY5 554 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 SHARPINQ9H0F6 387 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 ZNF275Q9NSD4 429 aaPredicted RBP11.37□□□□□ -0.59
NUP88-201ENST00000225696 SERTAD3Q9UJW9 196 aa11.37□□□□□ -0.59
NUP88-201ENST00000225696 HEATR5AQ86XA9 2040 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 ANXA2P2A6NMY6 339 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 ZNF879B4DU55 563 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 H0YC42 278 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 BRINP1O60477 761 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 OR2A4O95047 310 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 RPP14O95059 124 aaKnown RBP11.36□□□□□ -0.59
NUP88-201ENST00000225696 IGKV1D-16P01601 117 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 IFNGR1P15260 489 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 SLC6A6P31641 620 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 MGAT2Q10469 447 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 CBFBQ13951 182 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 ALG10BQ5I7T1 473 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 FAM78AQ5JUQ0 283 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 ELFN2Q5R3F8 820 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 TMEM69Q5SWH9 247 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 DCAF12L2Q5VW00 463 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 ZNF626Q68DY1 528 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 OR7E24Q6IFN5 339 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 ARSKQ6UWY0 536 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 BAIAP2L2Q6UXY1 529 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 SYS1Q8N2H4 156 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 SPICQ8N5J4 248 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 NPEPL1Q8NDH3 523 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 CCL4L1Q8NHW4 92 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 C1orf216Q8TAB5 229 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 RAB7BQ96AH8 199 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 HSPA12BQ96MM6 686 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 OR2A7Q96R45 310 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 OR2A5Q96R48 311 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 NKX3-1Q99801 234 aaPredicted RBP11.36□□□□□ -0.59
NUP88-201ENST00000225696 RNF208Q9H0X6 261 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 SLC6A17Q9H1V8 727 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 TMEM27Q9HBJ8 222 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 FGF22Q9HCT0 170 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 TAS2R5Q9NYW4 299 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 SLC22A7Q9Y694 548 aa11.36□□□□□ -0.59
NUP88-201ENST00000225696 BET1O15155 118 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 ZNF749O43361 778 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 PRAF2O60831 178 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 GIPP09681 153 aaPredicted RBP11.35□□□□□ -0.59
NUP88-201ENST00000225696 SMIM10L1P0DMW3 83 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 CCL5P13501 91 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 NUP62P37198 522 aaPredicted RBP11.35□□□□□ -0.59
NUP88-201ENST00000225696 SOX2P48431 317 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 KCNAB1Q14722 419 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 ARHGAP11AQ6P4F7 1023 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 ZNF613Q6PF04 617 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 CFAP77Q6ZQR2 320 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 OR6V1Q8N148 313 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 ZNF511Q8NB15 262 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 OR14A16Q8NHC5 309 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 SMIM10Q96HG1 83 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 Q96M85 177 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 TIMM29Q9BSF4 260 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 RAB11FIP5Q9BXF6 653 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 MFRPQ9BY79 579 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 FBXL2Q9UKC9 423 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 KLHDC2Q9Y2U9 406 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 CHURC1-FNTBB4DL54 471 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 IFNGP01579 166 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 CPN1P15169 458 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 SPI1P17947 270 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 MAP3K8P41279 467 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 DIO1P49895 249 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 ACTA2P62736 377 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 ACTG2P63267 376 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 POU4F2Q12837 409 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 CST6Q15828 149 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 HYAL4Q2M3T9 481 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 YOD1Q5VVQ6 348 aaPredicted RBP11.35□□□□□ -0.59
NUP88-201ENST00000225696 ATRAIDQ6UW56 229 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 KIRREL2Q6UWL6 708 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 NUDT18Q6ZVK8 323 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 OR52H1Q8NGJ2 320 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 FLVCR1-AS1Q8TAF5 88 aa11.35□□□□□ -0.59
NUP88-201ENST00000225696 STK35Q8TDR2 534 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms