RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 PWWP2BQ6NUJ5 590 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 WDR88Q6ZMY6 472 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 DVL3Q92997 716 aaPredicted RBP13.09□□□□□ -0.31
SHPK-201ENST00000225519 GIMAP5Q96F15 307 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 CMTM3Q96MX0 182 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 TBC1D3EA0A087X179 549 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 ZNF749O43361 778 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 OR2T7P0C7T2 308 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 EPCAMP16422 314 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 AK4P27144 223 aaPredicted RBP13.09□□□□□ -0.31
SHPK-201ENST00000225519 DPP4P27487 766 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 RPS15P62841 145 aaKnown RBP13.09□□□□□ -0.31
SHPK-201ENST00000225519 S100A12P80511 92 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 ZNF234Q14588 700 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 OR2T27Q8NH04 317 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 HAVCR1Q96D42 359 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 ZNF75AQ96N20 296 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 ZNF559Q9BR84 538 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 C6orf106Q9H6K1 298 aaPredicted RBP13.09□□□□□ -0.31
SHPK-201ENST00000225519 FKRPQ9H9S5 495 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 TREM1Q9NP99 234 aa13.09□□□□□ -0.31
SHPK-201ENST00000225519 IDSB3KWA1 339 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 RPA2P15927 270 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 SELPP16109 830 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 ODF4Q2M2E3 257 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 ARHGAP11AQ6P4F7 1023 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 OR4N5Q8IXE1 308 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 NRSN1Q8IZ57 195 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 CCDC107Q8WV48 283 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 VN1R3Q9BXE9 311 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 PBX4Q9BYU1 374 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 TSPAN10Q9H1Z9 355 aaPredicted RBP13.08□□□□□ -0.32
SHPK-201ENST00000225519 RASL12Q9NYN1 266 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 SIGLEC7Q9Y286 467 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 A0A0D9SG52 128 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 CENPVL1A0A0U1RR11 272 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 FAM171A2A8MVW0 826 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 WASH3PC4AMC7 463 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 SGCEO43556 437 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 TMIGD3P0DMS9 266 aaPredicted RBP13.08□□□□□ -0.32
SHPK-201ENST00000225519 MRPL2Q5T653 305 aaKnown RBP13.08□□□□□ -0.32
SHPK-201ENST00000225519 C17orf99Q6UX52 265 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 SLC2A12Q8TD20 617 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 SLC19A3Q9BZV2 496 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 OR52A5Q9H2C5 316 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 PIGMQ9H3S5 423 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 NCDNQ9UBB6 729 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 ZNF281Q9Y2X9 895 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 HEATR5BQ9P2D3 2071 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 TRAV18A0A075B6X5 111 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 RFPL4AA6NLU0 287 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 OR5K4A6NMS3 321 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 RFPL4AL1F8VTS6 287 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 LINC01387J3KSC0 135 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 GPRIN2O60269 458 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 ZIC2O95409 532 aaPredicted RBP13.08□□□□□ -0.32
SHPK-201ENST00000225519 MPGP29372 298 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 LTBQ06643 244 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 RNF113BQ8IZP6 322 aaKnown RBP13.08□□□□□ -0.32
SHPK-201ENST00000225519 PUSL1Q8N0Z8 303 aaKnown RBP13.08□□□□□ -0.32
SHPK-201ENST00000225519 WNT2BQ93097 391 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 VRK1Q99986 396 aaPredicted RBP13.08□□□□□ -0.32
SHPK-201ENST00000225519 STARD7Q9NQZ5 370 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 CCL26Q9Y258 94 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 NOP16Q9Y3C1 178 aaKnown RBP13.08□□□□□ -0.32
SHPK-201ENST00000225519 SCN3AQ9NY46 2000 aa13.08□□□□□ -0.32
SHPK-201ENST00000225519 OLFM2O95897 454 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 MAPK3P27361 379 aaPredicted RBP13.07□□□□□ -0.32
SHPK-201ENST00000225519 NDUFS1P28331 727 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 TMEM35AQ53FP2 167 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 FAM220AQ7Z4H9 259 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 LINC00469Q8N7U9 141 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 OR1M1Q8NGA1 313 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 NANPQ8TBE9 248 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 ZNF764Q96H86 408 aaPredicted RBP13.07□□□□□ -0.32
SHPK-201ENST00000225519 CMSS1Q9BQ75 279 aaKnown RBP13.07□□□□□ -0.32
SHPK-201ENST00000225519 PRSS27Q9BQR3 290 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 TM7SF3Q9NS93 570 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 C17orf113A0A1B0GUU1 675 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 PIN1P1O15428 100 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 LILRB5O75023 590 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 PAPLNO95428 1278 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 CSF1P09603 554 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 MST1P26927 711 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 HSD17B2P37059 387 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 PPP2CBP62714 309 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 PPP2CAP67775 309 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 BTN3A2P78410 334 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 GUCA2AQ02747 115 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 ILF3Q12906 894 aaKnown RBP eCLIP13.07□□□□□ -0.32
SHPK-201ENST00000225519 GUCA2BQ16661 112 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 MANEAQ5SRI9 462 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 LY6G5CQ5SRR4 150 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 COL13A1Q5TAT6 717 aaPredicted RBP13.07□□□□□ -0.32
SHPK-201ENST00000225519 SLC48A1Q6P1K1 146 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 OR2W3Q7Z3T1 314 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 STEAP2Q8NFT2 490 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 OR4D10Q8NGI6 311 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 SLC25A28Q96A46 364 aa13.07□□□□□ -0.32
SHPK-201ENST00000225519 SEC22AQ96IW7 307 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms