RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 RUNX1T1Q06455 604 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 FAM69AQ5T7M9 428 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 C22orf42Q6IC83 251 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 LEG1Q6P5S2 330 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 CD200R1LQ6Q8B3 271 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 FAM122BQ7Z309 247 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 ADGRG3Q86Y34 549 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 MFSD4AQ8N468 514 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 ZFP41Q8N8Y5 198 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 GALNT6Q8NCL4 622 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 LSM14AQ8ND56 463 aaKnown RBP15.8■□□□□ 0.12
VRK1-201ENST00000216639 OR2T27Q8NH04 317 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 RASD2Q96D21 266 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 ZMYND19Q96E35 227 aaPredicted RBP15.8■□□□□ 0.12
VRK1-201ENST00000216639 TRMT61AQ96FX7 289 aaKnown RBP15.8■□□□□ 0.12
VRK1-201ENST00000216639 Q96M85 177 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 ZPBPQ9BS86 351 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 ZNF700Q9H0M5 742 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 OCEL1Q9H607 264 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 ISG20L2Q9H9L3 353 aaKnown RBP15.8■□□□□ 0.12
VRK1-201ENST00000216639 PPP4R1LQ9P1A2 415 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 LOXL2Q9Y4K0 774 aa15.8■□□□□ 0.12
VRK1-201ENST00000216639 IGHV1-45A0A0A0MS14 117 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 TMEM72A0PK05 275 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 OR6C68A6NDL8 312 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 TAF4O00268 1085 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 ADAM10O14672 748 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 SERPINI2O75830 405 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 AHSA1O95433 338 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 UMODP07911 640 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 ZNF12P17014 697 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 SPI1P17947 270 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 GALP22466 123 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 RPS19P39019 145 aaKnown RBP15.79■□□□□ 0.12
VRK1-201ENST00000216639 SLC25A1P53007 311 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 E2F1Q01094 437 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 C1orf140Q5VVS0 124 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 FNDC8Q8TC99 324 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 RNF138Q8WVD3 245 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 PMEPA1Q969W9 287 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 DDOQ99489 341 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 TM9SF2Q99805 663 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 MED18Q9BUE0 208 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 NMNAT2Q9BZQ4 307 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 RERGLQ9H628 205 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 METTL7AQ9H8H3 244 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 MOKQ9UQ07 419 aa15.79■□□□□ 0.12
VRK1-201ENST00000216639 KLF7O75840 302 aaPredicted RBP15.78■□□□□ 0.12
VRK1-201ENST00000216639 F13BP05160 661 aa15.78■□□□□ 0.12
VRK1-201ENST00000216639 CD53P19397 219 aa15.78■□□□□ 0.12
VRK1-201ENST00000216639 APOBEC1P41238 236 aaKnown RBP15.78■□□□□ 0.12
VRK1-201ENST00000216639 ACTA2P62736 377 aa15.78■□□□□ 0.12
VRK1-201ENST00000216639 ACTG2P63267 376 aa15.78■□□□□ 0.12
VRK1-201ENST00000216639 SGCBQ16585 318 aa15.78■□□□□ 0.12
VRK1-201ENST00000216639 OR5J2Q8NH18 312 aa15.78■□□□□ 0.12
VRK1-201ENST00000216639 M1APQ8TC57 530 aa15.78■□□□□ 0.12
VRK1-201ENST00000216639 SLC25A36Q96CQ1 311 aa15.78■□□□□ 0.12
VRK1-201ENST00000216639 SPACA9Q96E40 222 aaPredicted RBP15.78■□□□□ 0.12
VRK1-201ENST00000216639 TMED9Q9BVK6 235 aa15.78■□□□□ 0.12
VRK1-201ENST00000216639 SNTG1Q9NSN8 517 aa15.78■□□□□ 0.12
VRK1-201ENST00000216639 GALNT8Q9NY28 637 aa15.78■□□□□ 0.12
VRK1-201ENST00000216639 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 A0A1W2PQL4 384 aaPredicted RBP15.77■□□□□ 0.12
VRK1-201ENST00000216639 TP53I11O14683 189 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 NPIPB7O75200 414 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 GLCEO94923 617 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 CDRT1O95170 752 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 RENP00797 406 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 PRKCAP17252 672 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 CD40LGP29965 261 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 FABP5Q01469 135 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 ZNF45Q02386 682 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 ZNF85Q03923 595 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 KRR1Q13601 381 aaKnown RBP15.77■□□□□ 0.12
VRK1-201ENST00000216639 TRAM1Q15629 374 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 NTRK2Q16620 822 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.77■□□□□ 0.123e-7■□□□□ 10.2
VRK1-201ENST00000216639 OR5M10Q6IEU7 315 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 LYPD8Q6UX82 237 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 SLC35F2Q8IXU6 374 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 OR6K6Q8NGW6 343 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 OR6S1Q8NH40 331 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 C4orf36Q96KX1 117 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 CEP19Q96LK0 163 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 RASL10BQ96S79 203 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 PTDSS2Q9BVG9 487 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 KCNN2Q9H2S1 579 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 GALNT9Q9HCQ5 603 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 YARS2Q9Y2Z4 477 aaKnown RBP15.77■□□□□ 0.12
VRK1-201ENST00000216639 B3GALT1Q9Y5Z6 326 aa15.77■□□□□ 0.12
VRK1-201ENST00000216639 C2orf72A6NCS6 295 aa15.77■□□□□ 0.11
VRK1-201ENST00000216639 J3QLW9 94 aa15.77■□□□□ 0.11
VRK1-201ENST00000216639 RNF13O43567 381 aa15.77■□□□□ 0.11
VRK1-201ENST00000216639 STK17BO94768 372 aa15.77■□□□□ 0.11
VRK1-201ENST00000216639 OR6A2O95222 327 aa15.77■□□□□ 0.11
VRK1-201ENST00000216639 GAAP10253 952 aa15.77■□□□□ 0.11
VRK1-201ENST00000216639 COX6A1P12074 109 aa15.77■□□□□ 0.11
VRK1-201ENST00000216639 ZNF19P17023 458 aa15.77■□□□□ 0.11
VRK1-201ENST00000216639 CDKN2AP42771 156 aaKnown RBP15.77■□□□□ 0.11
VRK1-201ENST00000216639 ZNF41P51814 821 aaPredicted RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms