RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 RNF220Q5VTB9 566 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 PRAMEF8Q5VWM4 474 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 PRAMEF7Q5VXH5 474 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 TMEM225Q6GV28 225 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 WBP2NLQ6ICG8 309 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 TUBA1AQ71U36 451 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 SLC46A3Q7Z3Q1 461 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 SPATA19Q7Z5L4 167 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 EPHX4Q8IUS5 362 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 C3orf49Q96BT1 292 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 KCNS3Q9BQ31 491 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 TAPBPLQ9BX59 468 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 SEC61A2Q9H9S3 476 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 CHST2Q9Y4C5 530 aa17.12■□□□□ 0.33
SYNGR1-201ENST00000216155 ARPC4-TTLL3A0A0A6YYG9 625 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 LOC100289279A0A1B0GTE1 492 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 LOC390937A0A1W2PQ73 354 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 TMEM229AB2RXF0 380 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 NR5A2O00482 541 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 RFXANKO14593 260 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 NPIPB7O75200 414 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 UPK3AO75631 287 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 PDE5AO76074 875 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 VAMP5O95183 116 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 KRT75O95678 551 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 BCHEP06276 602 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 CECR9P0C854 216 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 PRG2P13727 222 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 APEHP13798 732 aaKnown RBP17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 ETFAP13804 333 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 UBE2NP61088 152 aaKnown RBP17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 NAAAQ02083 359 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 ADIPOQQ15848 244 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 CARTPTQ16568 116 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 RPS26P11Q5JNZ5 115 aaPredicted RBP17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 FAM120AOSQ5T036 256 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 C1orf140Q5VVS0 124 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 NIPAL3Q6P499 406 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 MREGQ8N565 214 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 BCL2L2Q92843 193 aaPredicted RBP17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 FOXN4Q96NZ1 517 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 VRK1Q99986 396 aaPredicted RBP17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 C19orf24Q9BVV8 132 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 BPESC1Q9GZL8 116 aa17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 MYOZ1Q9NP98 299 aaPredicted RBP17.11■□□□□ 0.33
SYNGR1-201ENST00000216155 A0A096LPE4 126 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 A0A1W2PPZ6 126 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 B9A039 149 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 IGLV1-44P01699 117 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 CRYAAP02489 173 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 OR4A8P0C604 315 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 EPHA3P29320 983 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 CALCRP30988 508 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 CRISP3P54108 245 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 COPZ1P61923 177 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 EFNB3Q15768 340 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 WDR93Q6P2C0 686 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 VHLLQ6RSH7 139 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 CLIP4Q8N3C7 705 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 MAGEE2Q8TD90 523 aaPredicted RBP17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 ZNF317Q96PQ6 595 aaPredicted RBP17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 ZBTB18Q99592 522 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 PLK3Q9H4B4 646 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 WDR55Q9H6Y2 383 aaPredicted RBP17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 PRDM4Q9UKN5 801 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 RASD1Q9Y272 281 aa17.1■□□□□ 0.33
SYNGR1-201ENST00000216155 OR6C65A6NJZ3 312 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 FTCDNL1E5RQL4 147 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 IGKV3-15P01624 115 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 TFPTP0C1Z6 253 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 PAX7P23759 505 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 PPOXP50336 477 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 DSTNP60981 165 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 C3orf36Q3SXR2 165 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 GTDC1Q4AE62 458 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 ANKRD16Q6P6B7 361 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 SERPINA11Q86U17 422 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 MYPOPQ86VE0 399 aaPredicted RBP17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 GLB1L3Q8NCI6 653 aaPredicted RBP17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 SLC38A5Q8WUX1 472 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 TMEM19Q96HH6 336 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 SOX7Q9BT81 388 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 PTDSS2Q9BVG9 487 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 LINC00470Q9BZP3 86 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 CALML5Q9NZT1 146 aa17.09■□□□□ 0.33
SYNGR1-201ENST00000216155 A0A096LPI6 279 aa17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 CELA3BP08861 270 aa17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 PNMTP11086 282 aa17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 ZNF23P17027 643 aa17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 NCF2P19878 526 aaPredicted RBP17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 CRATP43155 626 aa17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 ROR2Q01974 943 aaKnown RBP17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 LARS2Q15031 903 aaKnown RBP17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 IQCCQ4KMZ1 466 aa17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 TNFAIP8L3Q5GJ75 292 aa17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 KDM8Q8N371 416 aa17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 STK35Q8TDR2 534 aa17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 SEC14L4Q9UDX3 406 aa17.08■□□□□ 0.32
SYNGR1-201ENST00000216155 HDAC3O15379 428 aa17.07■□□□□ 0.32
SYNGR1-201ENST00000216155 ZNF432O94892 652 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms