RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 EGFP01133 1207 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 KLKB1P03952 638 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 MGST1P10620 155 aaKnown RBP12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 CHRNB1P11230 501 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 TPT1P13693 172 aaKnown RBP12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 BIDP55957 195 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 IKZF1Q13422 519 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 WBP2NLQ6ICG8 309 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 ATP13A2Q9NQ11 1180 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 NUDT1P36639 197 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 FJX1Q86VR8 437 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 C11orf54Q9H0W9 315 aaPredicted RBP12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 GLIPR2Q9H4G4 154 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 SEMA4GQ9NTN9 838 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF281Q9Y2X9 895 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 HYAL3O43820 417 aaPredicted RBP12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 TFAP2AP05549 437 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 OR1D5P58170 312 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 GALEQ14376 348 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 PDZD11Q5EBL8 140 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 HIST2H3PS2Q5TEC6 136 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 SIAH3Q8IW03 269 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 GOLM1Q8NBJ4 401 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 DMBX1Q8NFW5 382 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 GPR78Q96P69 363 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 CMSS1Q9BQ75 279 aaKnown RBP12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 ULBP2Q9BZM5 246 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 BANF2Q9H503 90 aa12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 C8orf33Q9H7E9 229 aaPredicted RBP12.63□□□□□ -0.39
TGFBR3-201ENST00000212355 GJE1A6NN92 205 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 NSA2O95478 260 aaKnown RBP12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 LIPAP38571 399 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 BCL6P41182 706 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 MTCP1P56278 107 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 MLLT11Q13015 90 aaPredicted RBP12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 SERTAD2Q14140 314 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 CRMP1Q14194 572 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 MED25Q71SY5 747 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 CNTN4Q8IWV2 1026 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 PATE1Q8WXA2 126 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 FGGYQ96C11 551 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 PDCD1LG2Q9BQ51 273 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 ALG12Q9BV10 488 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 TMEM100Q9NV29 134 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 MAN2B1O00754 1011 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF217O75362 1048 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 DBPQ10586 325 aaPredicted RBP12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 TESK1Q15569 626 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 OR13C5Q8NGS8 318 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 OR6F1Q8NGZ6 308 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 FAM213BQ8TBF2 198 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 POFUT1Q9H488 388 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF816-ZNF321PA0A0X1KG74 233 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 MYF5P13349 255 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 ELAVL4P26378 380 aaKnown RBP12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 GJA4P35212 333 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 AADACL3Q5VUY0 350 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF321PQ8N8H1 164 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 WBP2Q969T9 261 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 TBC1D20Q96BZ9 403 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 TM4SF18Q96CE8 201 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 ELP4Q96EB1 424 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC41A2Q96JW4 573 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 RABL2AQ9UBK7 228 aaPredicted RBP12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 ASB1Q9Y576 335 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 FURINP09958 794 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF767PQ75MW2 155 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 CLEC1AQ8NC01 280 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 OR10K1Q8NGX5 313 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 TXNDC15Q96J42 360 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 SORCS2Q96PQ0 1159 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 EMC6Q9BV81 110 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 LIN7BQ9HAP6 207 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 ATG4BQ9Y4P1 393 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 PCDHGA5Q9Y5G8 931 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 URGCP-MRPS24S4R325 110 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 B4DXG7 233 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 EFNA3P52797 238 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 OR5AS1Q8N127 324 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 RNF170Q96K19 258 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 SGPP1Q9BX95 441 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC6A20Q9NP91 592 aa12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 MBNL1Q9NR56 388 aaKnown RBP12.62□□□□□ -0.39
TGFBR3-201ENST00000212355 MBLAC1A4D2B0 266 aaPredicted RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 A6NIZ1 184 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 AQP7O14520 342 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 SLC1A3P43003 542 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 RAP1BP61224 184 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 RAP1AP62834 184 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 FCN2Q15485 313 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 OR6T1Q8NGN1 323 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 ABHD4Q8TB40 342 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 ORAI1Q96D31 301 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 BMFQ96LC9 184 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 ZNF436Q9C0F3 470 aaPredicted RBP12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 SCRG1O75711 98 aa12.61□□□□□ -0.39
TGFBR3-201ENST00000212355 SCGB1D1O95968 90 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms