RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 USP53Q70EK8 1073 aa13.84□□□□□ -0.19
EFNB1-201ENST00000204961 DPY19L4Q7Z388 723 aa13.84□□□□□ -0.19
EFNB1-201ENST00000204961 TMEM151BQ8IW70 566 aa13.84□□□□□ -0.19
EFNB1-201ENST00000204961 CDRT4Q8N9R6 151 aa13.84□□□□□ -0.19
EFNB1-201ENST00000204961 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.84□□□□□ -0.19
EFNB1-201ENST00000204961 ATOH1Q92858 354 aaPredicted RBP13.84□□□□□ -0.19
EFNB1-201ENST00000204961 MOGAT1Q96PD6 335 aa13.84□□□□□ -0.19
EFNB1-201ENST00000204961 ADOQ96SZ5 270 aa13.84□□□□□ -0.19
EFNB1-201ENST00000204961 C1QTNF7Q9BXJ2 289 aa13.84□□□□□ -0.19
EFNB1-201ENST00000204961 CRISPLD2Q9H0B8 497 aa13.84□□□□□ -0.19
EFNB1-201ENST00000204961 TMEM138Q9NPI0 162 aa13.84□□□□□ -0.19
EFNB1-201ENST00000204961 C2orf42Q9NWW7 574 aa13.84□□□□□ -0.19
EFNB1-201ENST00000204961 C19orf53Q9UNZ5 99 aaPredicted RBP13.84□□□□□ -0.19
EFNB1-201ENST00000204961 PCDH15Q96QU1 1955 aa13.83□□□□□ -0.19
EFNB1-201ENST00000204961 IGHA1P01876 353 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 PDGFAP04085 211 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 THBS2P35442 1172 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 RAD52P43351 418 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 EIF1AXP47813 144 aaKnown RBP13.83□□□□□ -0.2
EFNB1-201ENST00000204961 NANOS3P60323 173 aaKnown RBP13.83□□□□□ -0.2
EFNB1-201ENST00000204961 SIRPAP78324 504 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 PSG6Q00889 435 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 GUCA2AQ02747 115 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 DUSP8Q13202 625 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 LRRC37A5PQ49AS3 106 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 CDONQ4KMG0 1287 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 CD200R1LQ6Q8B3 271 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 NHLRC1Q6VVB1 395 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 LNX2Q8N448 690 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 NT5DC2Q9H857 520 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 CDC40O60508 579 aaKnown RBP eCLIP13.83□□□□□ -0.2
EFNB1-201ENST00000204961 SLC19A2O60779 497 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 WISP1O95388 367 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 CBX7O95931 251 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 CTXN1P60606 82 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 ATXN7L3Q14CW9 347 aaPredicted RBP13.83□□□□□ -0.2
EFNB1-201ENST00000204961 MRGPRX1Q96LB2 322 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 MAP3K3Q99759 626 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 MED18Q9BUE0 208 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 ZNF350Q9GZX5 532 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 NKX2-4Q9H2Z4 354 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 LIN7BQ9HAP6 207 aa13.83□□□□□ -0.2
EFNB1-201ENST00000204961 EXOGQ9Y2C4 368 aaKnown RBP13.83□□□□□ -0.2
EFNB1-201ENST00000204961 URADA6NGE7 173 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 TGFBR3LH3BV60 316 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 EIF1AYO14602 144 aaKnown RBP13.82□□□□□ -0.2
EFNB1-201ENST00000204961 IFNGP01579 166 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 EPXP11678 715 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 SLC6A1P30531 599 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 MELKQ14680 651 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 GARNL3Q5VVW2 1013 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 FGD2Q7Z6J4 655 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 YIPF5Q969M3 257 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 TGM7Q96PF1 710 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 MESP1Q9BRJ9 268 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 DHCR7Q9UBM7 475 aaKnown RBP13.82□□□□□ -0.2
EFNB1-201ENST00000204961 ZNF223Q9UK11 482 aaPredicted RBP13.82□□□□□ -0.2
EFNB1-201ENST00000204961 A0A1W2PQF6 199 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 ELOA3DA6NLF2 546 aaPredicted RBP13.82□□□□□ -0.2
EFNB1-201ENST00000204961 SLC43A1O75387 559 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 SLC6A6P31641 620 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 KIR2DL1P43626 348 aaPredicted RBP13.82□□□□□ -0.2
EFNB1-201ENST00000204961 HHEXQ03014 270 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 DUSP6Q16828 381 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 ELOA3BQ3SY89 546 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 OR10K2Q6IF99 312 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 C11orf88Q6PI97 169 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 Q6ZS52 159 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 FAM219AQ8IW50 185 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 GJD3Q8N144 294 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 ELOA3Q8NG57 546 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 MOAP1Q96BY2 351 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 CNN2Q99439 309 aaKnown RBP13.82□□□□□ -0.2
EFNB1-201ENST00000204961 PILRAQ9UKJ1 303 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 ZFPL1O95159 310 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 POU3F2P20265 443 aaPredicted RBP13.82□□□□□ -0.2
EFNB1-201ENST00000204961 BTCP35070 178 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 MTNR1BP49286 362 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 TPMTP51580 245 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 C19orf57Q0VDD7 668 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 SHHQ15465 462 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 MEP1BQ16820 701 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 PRICKLE4Q2TBC4 344 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 C1orf189Q5VU69 101 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 MDGA2Q7Z553 956 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 TCTE3Q8IZS6 198 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 ZNF676Q8N7Q3 588 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 SYNPRQ8TBG9 265 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 PGLYRP3Q96LB9 341 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 WDR76Q9H967 626 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 SFXN1Q9H9B4 322 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 KLHDC2Q9Y2U9 406 aa13.82□□□□□ -0.2
EFNB1-201ENST00000204961 SOX1O00570 391 aaPredicted RBP13.81□□□□□ -0.2
EFNB1-201ENST00000204961 KLF4O43474 513 aa13.81□□□□□ -0.2
EFNB1-201ENST00000204961 TRAPPC2P0DI81 140 aa13.81□□□□□ -0.2
EFNB1-201ENST00000204961 TRAPPC2BP0DI82 140 aa13.81□□□□□ -0.2
EFNB1-201ENST00000204961 HLA-DMAP28067 261 aa13.81□□□□□ -0.2
EFNB1-201ENST00000204961 SLC36A2Q495M3 483 aa13.81□□□□□ -0.2
EFNB1-201ENST00000204961 B3GNTL1Q67FW5 361 aaPredicted RBP13.81□□□□□ -0.2
EFNB1-201ENST00000204961 BICRALQ6AI39 1079 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms