RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 LRRC37A5PQ49AS3 106 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 MMP21Q8N119 569 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 OR5AK3PQ8NH89 298 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 DYNC2LI1Q8TCX1 351 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 CXorf58Q96LI9 332 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF331Q9NQX6 463 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SMOXQ9NWM0 555 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 NFS1Q9Y697 457 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 NCBP2LA6PVI3 153 aaKnown RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SLC35E2BP0CK96 405 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 DUSP1P28562 367 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF280AP59817 542 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 GPM6BQ13491 265 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 NADSYN1Q6IA69 706 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 PTRH1Q86Y79 214 aaKnown RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 OR4E2Q8NGC2 313 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ANGPTL6Q8NI99 470 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM239Q8WW34 195 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 RNF11Q9Y3C5 154 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ANAPC1Q9H1A4 1944 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 A0A0J9YY10 115 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 LOC100289279A0A1B0GTE1 492 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 A0A1B0GVT2 93 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 FAM24AA6NFZ4 105 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TP73O15350 636 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ZFAND5O76080 213 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SPDEFO95238 335 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SOX14O95416 240 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 CLDN7O95471 211 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 RHOP08100 348 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 CHRNEQ04844 493 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 DCAF12L1Q5VU92 463 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SPRYD7Q5W111 196 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 MEPCEQ7L2J0 689 aaKnown RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ANKLE1Q8NAG6 615 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 OR52N1Q8NH53 320 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 GAB3Q8WWW8 586 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 RAB3CQ96E17 227 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 STACQ99469 402 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ZFYVE21Q9BQ24 234 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TXNL4BQ9NX01 149 aaKnown RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 OTOL1A6NHN0 477 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 PRSS44E7EML9 344 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TPOP07202 933 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 CD46P15529 392 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 CRHBPP24387 322 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 EPHA5P54756 1037 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 C17orf67Q0P5P2 114 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 KCTD11Q693B1 232 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ETFRF1Q6IPR1 90 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 CAMKMTQ7Z624 323 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 CATSPERDQ86XM0 798 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 NRMQ8IXM6 262 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 Q8IYB0 196 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ARL14EPQ8N8R7 260 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 FAM156AQ8NDB6 213 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF583Q96ND8 569 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 XYLT2Q9H1B5 865 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ABCG8Q9H221 673 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 BCAS3Q9H6U6 928 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 NOX3Q9HBY0 568 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 FBXO8Q9NRD0 319 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 INIPQ9NRY2 104 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 PCDHGA7Q9Y5G6 932 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 H0YIV9 168 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 CFIP05156 583 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 HAPLN1P10915 354 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 PTHLHP12272 177 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 GUK1Q16774 197 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 MDGA2Q7Z553 956 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 BAGE3Q86Y29 109 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 BAGE2Q86Y30 109 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 OR1J1Q8NGS3 322 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 OR4A16Q8NH70 328 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 APH1AQ96BI3 265 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SOX7Q9BT81 388 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SULT2B1O00204 365 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SAP18O00422 153 aaKnown RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 LAMTOR5O43504 91 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 MT-ND4P03905 459 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 EGR3Q06889 387 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SSX1Q16384 188 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 LIPIQ6XZB0 460 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 DBX2Q6ZNG2 339 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 GOT1L1Q8NHS2 421 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TSLPQ969D9 159 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 SLC25A46Q96AG3 418 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 FBXL20Q96IG2 436 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 WASH6PQ9NQA3 447 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM129A0AVI4 362 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF587BE7ETH6 402 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 RNASEK-C17orf49H0YIS7 233 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 GPR25O00155 361 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TLE1Q04724 770 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM71Q6P5X7 295 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 GJC3Q8NFK1 279 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 PXT1Q8NFP0 134 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 BCL7CQ8WUZ0 217 aaPredicted RBP5.68□□□□□ -1.5
VPS13D-201ENST00000011700 TFAP2BQ92481 460 aa5.68□□□□□ -1.5
VPS13D-201ENST00000011700 HRASLS5Q96KN8 279 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms