RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TGM6O95932 706 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 TBC1D3HP0C7X1 549 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 GJA4P35212 333 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 PPP2CBP62714 309 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 PPP2CAP67775 309 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 MGAT2Q10469 447 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 STX4Q12846 297 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 TMEM69Q5SWH9 247 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 FCRL6Q6DN72 434 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 TBC1D3CQ6IPX1 549 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 GPAT4Q86UL3 456 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 TBC1D3Q8IZP1 549 aaPredicted RBP12.86□□□□□ -0.35
USH1C-201ENST00000005226 OR52R1Q8NGF1 315 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 FGF13Q92913 245 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 ASB16Q96NS5 453 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 REG4Q9BYZ8 158 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 SDHAF2Q9NX18 166 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 FOXJ3Q9UPW0 622 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 FKBP7Q9Y680 259 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 KCNMB2Q9Y691 235 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 LTBP2Q14767 1821 aa12.86□□□□□ -0.35
USH1C-201ENST00000005226 PRR19A6NJB7 356 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 ZNF879B4DU55 563 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 CTDSPLO15194 276 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 SIGLEC5O15389 551 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 ARPC5O15511 151 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 GNRH1P01148 92 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 HOXD4P09016 255 aaPredicted RBP12.85□□□□□ -0.35
USH1C-201ENST00000005226 OR8G3PP0DMU2 310 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 SMIM10L1P0DMW3 83 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 PGDP52209 483 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 SIGLEC14Q08ET2 396 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 IKZF1Q13422 519 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 PRICKLE4Q2TBC4 344 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 YOD1Q5VVQ6 348 aaPredicted RBP12.85□□□□□ -0.35
USH1C-201ENST00000005226 METTL11BQ5VVY1 283 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 ZNF613Q6PF04 617 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 ENPP7Q6UWV6 458 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 UNQ9370/PRO34162Q6UXP9 181 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 GLDNQ6ZMI3 551 aaPredicted RBP12.85□□□□□ -0.35
USH1C-201ENST00000005226 OR5M1Q8NGP8 315 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 SLC2A12Q8TD20 617 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 PATE1Q8WXA2 126 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 SMIM10Q96HG1 83 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 Q96M85 177 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 TAS2R10Q9NYW0 307 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 COLEC10Q9Y6Z7 277 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 MUC22E2RYF6 1773 aaPredicted RBP12.85□□□□□ -0.35
USH1C-201ENST00000005226 H0YC42 278 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 GABARAPH6UMI1 98 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 TRIM77I1YAP6 450 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 PYCARD-AS1I3L0S3 204 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 HCRTR1O43613 425 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 HNRNPA1P09651 372 aaKnown RBP eCLIP12.85□□□□□ -0.35
USH1C-201ENST00000005226 VSIG10L2P0DP72 767 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 ADRA2CP18825 462 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 HTRA4P83105 476 aaPredicted RBP12.85□□□□□ -0.35
USH1C-201ENST00000005226 TAGLNQ01995 201 aaKnown RBP12.85□□□□□ -0.35
USH1C-201ENST00000005226 NHLRC3Q5JS37 347 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 PWWP2BQ6NUJ5 590 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 TMEM81Q6P7N7 255 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 FIGLAQ6QHK4 219 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 SLC51BQ86UW2 128 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 ADGRG3Q86Y34 549 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 NPEPL1Q8NDH3 523 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 THEM6Q8WUY1 208 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 OR1E3Q8WZA6 343 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 KLHL15Q96M94 604 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 DUSP22Q9NRW4 184 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 KLF15Q9UIH9 416 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 SERTAD3Q9UJW9 196 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 KLHDC2Q9Y2U9 406 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 V9GY05 133 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 F5P12259 2224 aa12.85□□□□□ -0.35
USH1C-201ENST00000005226 hCG_1807616A0A1W2PRN6 198 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 OR6C74A6NCV1 312 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 MCRIP1C9JLW8 97 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 H0YGG7 62 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 AIPO00170 330 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 NDUFB2O95178 105 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 MYOGP15173 224 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 SPI1P17947 270 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 NFYAP23511 347 aaPredicted RBP12.84□□□□□ -0.35
USH1C-201ENST00000005226 LSSP48449 732 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 DIO1P49895 249 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 ARF3P61204 181 aaPredicted RBP12.84□□□□□ -0.35
USH1C-201ENST00000005226 ACTA2P62736 377 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 ACTG2P63267 376 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 POU4F2Q12837 409 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 ZMYND11Q15326 602 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 CSRP2Q16527 193 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 FAM69AQ5T7M9 428 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 SYS1Q8N2H4 156 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 OR4D10Q8NGI6 311 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 FLVCR1-AS1Q8TAF5 88 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 NT5CQ8TCD5 201 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 RNF166Q96A37 237 aaPredicted RBP12.84□□□□□ -0.35
USH1C-201ENST00000005226 TM4SF19Q96DZ7 209 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 SIPA1Q96FS4 1042 aa12.84□□□□□ -0.35
USH1C-201ENST00000005226 GINS4Q9BRT9 223 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms