RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Slc36a2Q8BHK3 478 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cstf2Q8BIQ5 580 aaKnown RBP19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 ChdhQ8BJ64 596 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Kcnk10Q8BUW1 535 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 NaxdQ9CZ42 343 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Gtf2e2Q9D902 292 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Plxdc2Q9DC11 530 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 PgdQ9DCD0 483 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Tnfrsf21Q9EPU5 655 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Adam25Q9R159 760 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Slc37a2Q9WU81 501 aa19.32■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Hsd3b3P26150 373 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Nedd8P29595 81 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Gstm5P48774 224 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Espl1P60330 2118 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Otx2P80206 289 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Gcnt2P97402 401 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Mtmr11Q3V1L6 700 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cd53Q61451 219 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Rpa2Q62193 270 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Tas2r110Q7M712 333 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Hs6st2Q80UW0 612 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Poldip3Q8BG81 420 aaKnown RBP19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Ebf4Q8K4J2 599 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr1423Q8VFV0 310 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Lnx2Q91XL2 687 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cmtm6Q9CZ69 183 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Obp1aQ9D3H2 163 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Mettl15Q9DCL4 406 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cd300ld4A2A7W1 245 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Shisa8J3QNX5 399 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Vmn1r27K7N688 303 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Klk1b5P15945 261 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Ext1P97464 746 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Mex3dQ3UE17 643 aaKnown RBP19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Laptm4aQ60961 233 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cd300ld3Q6SJQ5 245 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Mfsd8Q8BH31 519 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Reep4Q8K072 257 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Mboat2Q8R3I2 519 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Gstm4Q8R5I6 218 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr1393Q8VFA7 311 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr572Q8VGZ3 318 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 MmadhcQ99LS1 296 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Exo5Q9CXP9 373 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Dapl1Q9D757 107 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Q9DAS2 200 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Brix1Q9DCA5 353 aaKnown RBP19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Isoc2bQ9DCC7 210 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Tor3aQ9ER38 385 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Mrps34Q9JIK9 218 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Xpr1Q9Z0U0 695 aa19.31■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Gm7145A0A087WS64 360 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Kdf1A2A9F4 397 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr1215A3KGY3 312 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Zfand5O88878 213 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 P01634 136 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Fv1P70213 459 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Igfbp5Q07079 271 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Gcnt7Q3V3K7 433 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Snx33Q4VAA7 574 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Nr0b1Q61066 472 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cyb561a3Q6P1H1 242 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Slc6a5Q761V0 799 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Zfp954Q7TNU5 416 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 AI987944Q7TPX5 406 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr645Q7TRQ1 315 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr298Q7TS06 332 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr290Q7TS13 315 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Lamp3Q7TST5 411 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Serpina3fQ80X76 445 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 QdprQ8BVI4 241 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Fbxo45Q8K3B1 286 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Irf2bplQ8K3X4 775 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr461Q8VF30 313 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Ppil3Q9D6L8 161 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 H2bfmQ9DAB5 224 aa19.3■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Ttll3A4Q9E5 927 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Gm20518E9Q548 580 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Clcn7O70496 803 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Tnfrsf17O88472 185 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Cops4O88544 406 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Sftpa1P35242 248 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Foxk1P42128 719 aaKnown RBP19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Fkbp14P59024 211 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Slc22a13Q6A4L0 551 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Adam26bQ6IMH6 699 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Ckmt2Q6P8J7 419 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Mgat4bQ812F8 548 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Apoa5Q8C7G5 368 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 A730049H05RikQ8C940 139 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Klk13Q8CGR6 276 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Vmn1r201Q8R262 300 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Hsd17b13Q8VCR2 304 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Olfr340Q8VGL0 312 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 2610042L04RikQ9D073 150 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Dusp3Q9D7X3 185 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Tmem25Q9DCF1 365 aa19.29■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 4930595D18RikD3Z642 64 aa19.28■□□□□ 0.68
Ccdc88a-202ENSMUST00000109477 Jmjd7P0C872 316 aa19.28■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms