RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Lao1B1ARV3 523 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Cldn4O35054 210 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 DgkaO88673 730 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Pcp2P12660 120 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 H2-T3P14432 384 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Acp2P24638 423 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Cdk5P49615 292 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Tead3P70210 439 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Thbs2Q03350 1172 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Qsox2Q3TMX7 692 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Dtx3lQ3UIR3 748 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Slc27a5Q4LDG0 689 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Ttf1Q62187 859 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Hist2h2abQ64522 130 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Agfg2Q80WC7 479 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Trim69Q80X56 500 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Fbxo34Q80XI1 695 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Shisa7Q8C3Q5 558 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Noxa1Q8CJ00 444 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Rab38Q8QZZ8 211 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Olfr1232Q8VEX7 311 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Wdsub1Q9D0I6 474 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Cnot9Q9JKY0 299 aa9.02□□□□□ -0.96
Pcdh1-201ENSMUST00000057185 Mamdc4A2AJA7 1228 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Olfr601A2RS33 314 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Cd101A8E0Y8 1033 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Akirin2B1AXD8 201 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 ApelaP0DMC4 54 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Rplp0P14869 317 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Bdkrb2P32299 392 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 S100a11P50543 98 aaKnown RBP9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Defa14P50712 85 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Slc12a3P59158 1002 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Zdhhc2P59267 366 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 GnrhrQ01776 327 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Man1c1Q6NXK9 625 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Rps27Q6ZWU9 84 aaKnown RBP9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Tmed3Q78IS1 221 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Pgr15lQ80T54 456 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Dtx3Q80V91 347 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Slc38a9Q8BGD6 560 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Emc1Q8C7X2 997 aaKnown RBP9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Lyrm4Q8K215 91 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Spns1Q8R0G7 528 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Olfr881Q8VF63 314 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Asb15Q8VHS6 583 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Pcdhgb5Q91XX5 926 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Pno1Q9CPS7 248 aaKnown RBP9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Efcab11Q9D0E5 162 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Fam166aQ9D4K5 319 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Nr4a3Q9QZB6 627 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 TapbpQ9R233 465 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Nup214Q80U93 2085 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ckap5A2AGT5 2032 aaKnown RBP9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Cyp4a30bA0A087WS15 508 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Olfr1056A2AVY0 313 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Olfr420E9Q4G0 321 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 G430095P16RikE9Q913 147 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Slc16a5G5E8K6 468 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Cd8aP01731 247 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Fgf3P05524 245 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 UoxP25688 303 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ceacam1P31809 521 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 AmbpQ07456 349 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Itpripl2Q3UV16 535 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 BpiQ67E05 483 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 BocQ6AZB0 1110 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 AgmoQ8BS35 447 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Acot4Q8BWN8 421 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Grk5Q8VEB1 590 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Olfr160Q8VGE3 309 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ceacam2Q925P2 520 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Tktl1Q99MX0 595 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Slc52a3Q9D6X5 460 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Vmn1r48Q9EQ52 302 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gm15013V9GWY0 266 aa9.02□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gm11634A0A1B0GSX1 172 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Vmn2r101E9PZS9 857 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Ifi203O35368 408 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Lsm2O35900 95 aaKnown RBP9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 CtssO70370 340 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Grap2O89100 322 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 PpibP24369 216 aaKnown RBP9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Plin2P43883 425 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 AcadlP51174 430 aaKnown RBP9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 St3gal3P97325 374 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gdf9Q07105 441 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Mtf1Q07243 675 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Cnn2Q08093 305 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Riiad1Q3KNY5 119 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gm10750Q3V0I0 133 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Gcnt7Q3V3K7 433 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Taar7bQ5QD11 358 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Q5SPV6 233 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Laptm5Q61168 261 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 ManeaQ6NXH2 462 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Shc4Q6S5L9 626 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Olfr1219Q7TR04 311 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Olfr290Q7TS13 315 aa9.01□□□□□ -0.97
Pcdh1-201ENSMUST00000057185 Olfr270Q7TS19 314 aa9.01□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms