RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Dmrt1Q9QZ59 374 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Uchl1Q9R0P9 223 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 MeltfQ9R0R1 738 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tmem176bQ9R1Q6 263 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr1360K9J6X0 313 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Msx1P13297 303 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 BglapP86546 95 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Bglap2P86547 95 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Eci3Q78JN3 317 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr1359Q7TQU5 313 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slitrk2Q810C0 846 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Q8BPC6 396 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Cops7aQ9CZ04 275 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Cmss1Q9CZT6 276 aaKnown RBP17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Dcbld1Q9D4J3 503 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tnfsf14Q9QYH9 239 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Mocs2Q9Z223 189 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 H2afb1S4R1E0 115 aa17.29■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm3952A0A0A6YXJ1 191 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Zfp873A0A1B0GT64 667 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm17067E9Q6S4 354 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 UgdhO70475 493 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tcea1P10711 301 aaKnown RBP17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 DtymkP97930 212 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Obox3Q3UT54 335 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 CalcrQ60755 533 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 IppkQ6P1C1 489 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Eri1Q7TMF2 345 aaKnown RBP17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 JamlQ80UL9 379 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Pou6f2Q8BJI4 691 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Dusp28Q8BTR5 163 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Papd4Q91YI6 484 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 MmabQ9D273 237 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slc25a18Q9DB41 320 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slc39a1Q9QZ03 324 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 HnrnpdlQ9Z130 301 aaKnown RBP17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 CorinQ9Z319 1113 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Glb1l3A2RSQ1 649 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm14862B1AV28 81 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm20696H3BJN7 74 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Capza2P47754 286 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ccdc190Q3URK1 288 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Zfp791Q497V9 528 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Nrsn2Q5HZK2 202 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 St6gal1Q64685 403 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr1229Q7TQZ9 311 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 GskipQ8BGR8 139 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm11541Q8C4D8 108 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Flywch1Q8CI03 673 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Mrgpra1Q91WW5 304 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gdpd1Q9CRY7 314 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slc25a27Q9D6D0 322 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Alg5Q9DB25 324 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Sectm1bQ9JL59 212 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Rasal1Q9Z268 799 aa17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ybx2Q9Z2C8 360 aaKnown RBP17.28■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Col4a2P08122 1707 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm21149A0A0G2JFY7 255 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Igkv12-44A0A140T8M2 115 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tmed7D3YZZ5 224 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 CatsperdE9Q9F6 805 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm7970L7N271 213 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm7980L7N471 213 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Dbil5O09035 87 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Chrnb1P09690 501 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Actr1aP61164 376 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Pou3f4P62515 361 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tbx6P70327 436 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Tnfrsf26P83626 204 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Acp5Q05117 327 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Entpd6Q3U0P5 455 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Pik3ip1Q7TMJ8 264 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Olfr835Q7TRG7 311 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Aldh3b1Q80VQ0 468 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm9758Q80ZT2 255 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Cpt1cQ8BGD5 798 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Apbb3Q8R1C9 486 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Slc9a8Q8R4D1 576 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Actr1bQ8R5C5 376 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Oasl1Q8VI94 511 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gmeb1Q9JL60 562 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Ndrg3Q9QYF9 375 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 CalcrlQ9R1W5 463 aa17.27■□□□□ 0.36
Shkbp1-201ENSMUST00000003857 Gm14418A2ARR6 358 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Gm14322A2AW66 358 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Vmn2r113E9PZA6 856 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Cldn20G5E8X0 219 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Dll3O88516 592 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 SnrpbP27048 231 aaKnown RBP17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Arf3P61205 181 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 CbfbQ08024 187 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 UradQ283N4 178 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Olfr270Q7TS19 314 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Impad1Q80V26 356 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Ikzf4Q8C208 586 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Emc1Q8C7X2 997 aaKnown RBP17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Esrp2Q8K0G8 717 aaKnown RBP17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Lrg1Q91XL1 342 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Gm3854A0A1B0GSS6 495 aa17.26■□□□□ 0.35
Shkbp1-201ENSMUST00000003857 Morn1A2RTS7 477 aa17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms