RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 WDR1O75083 606 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 HIST1H2ABP04908 130 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 ASAH2BP0C7U1 165 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 GABRA1P14867 456 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 ABOP16442 354 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 MAKP20794 623 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 PTNP21246 168 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 PRKACGP22612 351 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 CBLP22681 906 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 PTGER4P35408 488 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 EIF1AXP47813 144 aaKnown RBP11.04□□□□□ -0.64
LINC00339-213ENST00000642137 GSSP48637 474 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 SLC9A3P48764 834 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 NUP107P57740 925 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 H3F3AP84243 136 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 COX10Q12887 443 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 TSPAN31Q12999 210 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 LAPTM4AQ15012 233 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 ZNF239Q16600 458 aaKnown RBP11.04□□□□□ -0.64
LINC00339-213ENST00000642137 SOWAHCQ53LP3 525 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-213ENST00000642137 CD300LDQ6UXZ3 194 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 H1FNTQ75WM6 255 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-213ENST00000642137 HIST3H2AQ7L7L0 130 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 SLC46A3Q7Z3Q1 461 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 ADGRE4PQ86SQ3 457 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 STK32CQ86UX6 486 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 HS3ST5Q8IZT8 346 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 C10orf53Q8N6V4 93 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 SCAIQ8N9R8 606 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 OR9Q2Q8NGE9 314 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 HIST1H2ACQ93077 130 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 SDCCAG3Q96C92 435 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 ZHX1-C8orf76Q96EF9 292 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 FAM46AQ96IP4 442 aaKnown RBP11.04□□□□□ -0.64
LINC00339-213ENST00000642137 MOGAT1Q96PD6 335 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 FEVQ99581 238 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 ASPNQ9BXN1 380 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 GABARAPL1Q9H0R8 117 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 ALKBH4Q9NXW9 302 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 MRPL39Q9NYK5 338 aaKnown RBP11.04□□□□□ -0.64
LINC00339-213ENST00000642137 NKX1-2Q9UD57 310 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-213ENST00000642137 OAZ3Q9UMX2 235 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 MAGED1Q9Y5V3 778 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-213ENST00000642137 ZZEF1O43149 2961 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 ZGRF1Q86YA3 2104 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 SAC3D1A6NKF1 404 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 EFCAB9A8MZ26 197 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 LRRN3E7EW58 273 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 PRRG2O14669 202 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 CASQ2O14958 399 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-213ENST00000642137 ZNHIT1O43257 154 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 PTP4A3O75365 173 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 SYNGR4O95473 234 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 ATP6V1G2O95670 118 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 ADAP00813 363 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 TPOP07202 933 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 TSPAN19P0C672 248 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 GSTM3P21266 225 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 ENPP1P22413 925 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 FPR3P25089 353 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 GTF2E2P29084 291 aaKnown RBP11.03□□□□□ -0.64
LINC00339-213ENST00000642137 GRPRP30550 384 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 DAPP51397 102 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 C19orf57Q0VDD7 668 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 ZP4Q12836 540 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 ZBED5Q49AG3 693 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 EMC4Q5J8M3 183 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 FAHD1Q6P587 224 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 PAQR6Q6TCH4 344 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 LSRQ86X29 649 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-213ENST00000642137 LRRC17Q8N6Y2 441 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 AQP11Q8NBQ7 271 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 ADPRHL1Q8NDY3 354 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 OR5J2Q8NH18 312 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 DNAJC9Q8WXX5 260 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 RELTQ969Z4 430 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 DNAJA3Q96EY1 480 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 ZNF845Q96IR2 970 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-213ENST00000642137 GPA33Q99795 319 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 TUBA1CQ9BQE3 449 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 SRXN1Q9BYN0 137 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 CALHM2Q9HA72 323 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 ZNF556Q9HAH1 456 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 PNPLA3Q9NST1 481 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 MCTS1Q9ULC4 181 aaKnown RBP11.03□□□□□ -0.64
LINC00339-213ENST00000642137 B3GALT5Q9Y2C3 310 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 ZNF175Q9Y473 711 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 BSNQ9UPA5 3926 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 SHANK1Q9Y566 2161 aa11.03□□□□□ -0.64
LINC00339-213ENST00000642137 LOC102725191A0A1B0GVB3 256 aa11.02□□□□□ -0.65
LINC00339-213ENST00000642137 UNC119BA6NIH7 251 aa11.02□□□□□ -0.65
LINC00339-213ENST00000642137 FIGNL2A6NMB9 653 aa11.02□□□□□ -0.65
LINC00339-213ENST00000642137 CLCA1A8K7I4 914 aa11.02□□□□□ -0.65
LINC00339-213ENST00000642137 MS4A18H0YCH9 400 aa11.02□□□□□ -0.65
LINC00339-213ENST00000642137 CDC42EP2O14613 210 aa11.02□□□□□ -0.65
LINC00339-213ENST00000642137 AKR7A3O95154 331 aa11.02□□□□□ -0.65
LINC00339-213ENST00000642137 VAMP5O95183 116 aa11.02□□□□□ -0.65
LINC00339-213ENST00000642137 SAGP10523 405 aaPredicted RBP11.02□□□□□ -0.65
LINC00339-213ENST00000642137 GPR4P46093 362 aa11.02□□□□□ -0.65
LINC00339-213ENST00000642137 PMS2P3Q13401 168 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 277.5 ms