RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 NCDNQ9UBB6 729 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF346Q9UL40 294 aaKnown RBP12.69□□□□□ -0.38
PHGDH-233ENST00000642021 BAIAP2Q9UQB8 552 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 RCE1Q9Y256 329 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 A6NCN8 305 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 OR6C68A6NDL8 312 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 GSTZ1O43708 216 aaPredicted RBP12.69□□□□□ -0.38
PHGDH-233ENST00000642021 SCO1O75880 301 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 SRMP19623 302 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 COL9A1P20849 921 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 DNASE1P24855 282 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 GRPRP30550 384 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 GDI1P31150 447 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF81P51508 661 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 HSD17B12Q53GQ0 312 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ZCCHC12Q6PEW1 402 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 OVCH1Q7RTY7 1134 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 LUZP2Q86TE4 346 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 CA13Q8N1Q1 262 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 SYS1Q8N2H4 156 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 OR56B4Q8NH76 319 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 PIGKQ92643 395 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 RBCK1Q9BYM8 510 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 C20orf85Q9H1P6 137 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 C14orf105Q9NVL8 296 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 GLTPQ9NZD2 209 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 EIF3KQ9UBQ5 218 aaKnown RBP12.69□□□□□ -0.38
PHGDH-233ENST00000642021 KLK11Q9UBX7 282 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 DTX4Q9Y2E6 619 aa12.69□□□□□ -0.38
PHGDH-233ENST00000642021 ARHGEF17Q96PE2 2063 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-233ENST00000642021 RASGRP1O95267 797 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF250P15622 560 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 S1PR1P21453 382 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 NUDT1P36639 197 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 CCR9P51686 369 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 NANOS3P60323 173 aaKnown RBP12.68□□□□□ -0.38
PHGDH-233ENST00000642021 PPP1CAP62136 330 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 TMEM31Q5JXX7 168 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 RPL22L1Q6P5R6 122 aaKnown RBP12.68□□□□□ -0.38
PHGDH-233ENST00000642021 UNQ9370/PRO34162Q6UXP9 181 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 LINGO2Q7L985 606 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 NPEPL1Q8NDH3 523 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 OR52I2Q8NH67 350 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 RNF166Q96A37 237 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-233ENST00000642021 FAM131CQ96AQ9 280 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 SLC25A38Q96DW6 304 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 BMFQ96LC9 184 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 C1QTNF7Q9BXJ2 289 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 PCOLCE2Q9UKZ9 415 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 ENTPD2Q9Y5L3 495 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 NDUFB2O95178 105 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 RPS15P62841 145 aaKnown RBP12.68□□□□□ -0.38
PHGDH-233ENST00000642021 TFF2Q03403 129 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 DYRK1AQ13627 763 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 EXOSC2Q13868 293 aaKnown RBP12.68□□□□□ -0.38
PHGDH-233ENST00000642021 SLC22A10Q63ZE4 541 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 FCRLAQ7L513 359 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 SLITRK4Q8IW52 837 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 YAF2Q8IY57 180 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF433Q8N7K0 673 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-233ENST00000642021 OR2T35Q8NGX2 323 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 OR14A16Q8NHC5 309 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 HMGB4Q8WW32 186 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 DDOQ99489 341 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 SPOCK3Q9BQ16 436 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 TWSG1Q9GZX9 223 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 METTL17Q9H7H0 456 aaPredicted RBP12.68□□□□□ -0.38
PHGDH-233ENST00000642021 HRASLSQ9HDD0 168 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 DIABLOQ9NR28 239 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 MYO15AQ9UKN7 3530 aa12.68□□□□□ -0.38
PHGDH-233ENST00000642021 RPS10-NUDT3A0A1W2PQS6 291 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 OR2W5A6NFC9 320 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 ANKRD61A6NGH8 418 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 SHOXO15266 292 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 GALR3O60755 368 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-233ENST00000642021 GATBO75879 557 aaKnown RBP12.67□□□□□ -0.38
PHGDH-233ENST00000642021 AK1P00568 194 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 CTRB1P17538 263 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 ZNF10P21506 573 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-233ENST00000642021 DIO1P49895 249 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 RAG2P55895 527 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 ACTA2P62736 377 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 ACTG2P63267 376 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 PON3Q15166 354 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 NNATQ16517 81 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 CTRB2Q6GPI1 263 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 NLRC3Q7RTR2 1065 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 LURAP1LQ8IV03 231 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 RGP1Q92546 391 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-233ENST00000642021 FGF14Q92915 247 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 RERGQ96A58 199 aaPredicted RBP12.67□□□□□ -0.38
PHGDH-233ENST00000642021 RASD2Q96D21 266 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 OR10A4Q9H209 315 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 FKRPQ9H9S5 495 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 PRDM9Q9NQV7 894 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 AUP1Q9Y679 476 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 CTDSPLO15194 276 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 RDH16O75452 317 aa12.67□□□□□ -0.38
PHGDH-233ENST00000642021 RPL4P36578 427 aaKnown RBP12.67□□□□□ -0.38
PHGDH-233ENST00000642021 VEGFCP49767 419 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms