RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	SLC9A8	Q9Y2E8	581 aa		13.3	□□□□□ -0.28
PHGDH-231	ENST00000641939	FLVCR1	Q9Y5Y0	555 aa		13.3	□□□□□ -0.28
PHGDH-231	ENST00000641939	CAPN7	Q9Y6W3	813 aa		13.3	□□□□□ -0.28
PHGDH-231	ENST00000641939	PLCE1	Q9P212	2302 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	LOC100653049	A0A140TA62	436 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939		M0QX08	132 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	FXYD1	O00168	92 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	LYZL6	O75951	148 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	KRT34	O76011	436 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	ATE1	O95260	518 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	AHSA1	O95433	338 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	PNMT	P11086	282 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	COX5A	P20674	150 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	GZMM	P51124	257 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	NR1H2	P55055	460 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	ALG10B	Q5I7T1	473 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	INTS11	Q5TA45	600 aa	Known RBP	13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	FBXW9	Q5XUX1	488 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	FAM91A1	Q658Y4	838 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	CASP12	Q6UXS9	341 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	PATL1	Q86TB9	770 aa	Known RBP	13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	UBE2J2	Q8N2K1	259 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	PCYOX1L	Q8NBM8	494 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	OR9K2	Q8NGE7	335 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	OR8J3	Q8NGG0	315 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	HSD17B8	Q92506	261 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	MBD6	Q96DN6	1003 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	HS3ST6	Q96QI5	342 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	ECSIT	Q9BQ95	431 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	SF3B5	Q9BWJ5	86 aa	Known RBP	13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	PRR14	Q9BWN1	585 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	HEATR1	Q9H583	2144 aa	Known RBP	13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	TMEM27	Q9HBJ8	222 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	PARPBP	Q9NWS1	579 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	SELENON	Q9NZV5	590 aa		13.29	□□□□□ -0.28
PHGDH-231	ENST00000641939	ALPK2	Q86TB3	2170 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	TPST2	O60704	377 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	LGI1	O95970	557 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	IGHV3-9	P01782	118 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	OPN1SW	P03999	348 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	C8B	P07358	591 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	IGHV1-2	P23083	117 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	EGR4	Q05215	589 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	OR1Q1	Q15612	314 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	TAB1	Q15750	504 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	DUSP7	Q16829	419 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	VMAC	Q2NL98	169 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	RABL3	Q5HYI8	236 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	TMEM225	Q6GV28	225 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	ALKBH2	Q6NS38	261 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	ULK3	Q6PHR2	472 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	C5orf46	Q6UWT4	87 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	GPAT4	Q86UL3	456 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	CALHM3	Q86XJ0	350 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	MFSD8	Q8NHS3	518 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	SLC38A4	Q969I6	547 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	SLC47A1	Q96FL8	570 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	ALPK1	Q96QP1	1244 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	WFDC6	Q9BQY6	131 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	PTDSS2	Q9BVG9	487 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	CXXC4	Q9H2H0	198 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	PIF1	Q9H611	641 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	GID8	Q9NWU2	228 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	ASB6	Q9NWX5	421 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	ARMCX1	Q9P291	453 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	ACAN	P16112	2415 aa		13.28	□□□□□ -0.28
PHGDH-231	ENST00000641939	MTOR	P42345	2549 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939		A0A0B4J2E0	115 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939		A0A1B0GX12	115 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	FTCDNL1	E5RQL4	147 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	VAMP5	O95183	116 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	GTF2E2	P29084	291 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	RPS5	P46782	204 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	P2RY4	P51582	365 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	STK11	Q15831	433 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	NRF1	Q16656	503 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	DEFB113	Q30KQ7	82 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	CCDC80	Q76M96	950 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	GPR32P1	Q8NGA4	272 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	TMEM45B	Q96B21	275 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	SLC25A36	Q96CQ1	311 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	KTI12	Q96EK9	354 aa	Predicted RBP	13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	PLPPR2	Q96GM1	343 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	ARHGDIG	Q99819	225 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	UBTD1	Q9HAC8	227 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	NGB	Q9NPG2	151 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	MALT1	Q9UDY8	824 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	RASD1	Q9Y272	281 aa		13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939	FLNA	P21333	2647 aa	Known RBP	13.27	□□□□□ -0.29
PHGDH-231	ENST00000641939		A0A087WUJ7	227 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	CCT8L1P	A6NM43	557 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939		M0R3H8	397 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	OR2T1	O43869	369 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	FMO6P	O60774	539 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	CCDC22	O60826	627 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	CD53	P19397	219 aa		13.26	□□□□□ -0.29
PHGDH-231	ENST00000641939	GGT1	P19440	569 aa		13.26	□□□□□ -0.29

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