RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 TLX2O43763 284 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-221ENST00000641573 SLC25A12O75746 678 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 HMGN1P05114 100 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 SLC6A6P31641 620 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 GRK5P34947 590 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 ZNF41P51814 821 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-221ENST00000641573 NUDT6P53370 316 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 NR1H2P55055 460 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 MLLT10P55197 1068 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 EFNB1P98172 346 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 FOXF1Q12946 379 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 FHL1Q13642 323 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 OCLNQ16625 522 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 TMEM201Q5SNT2 666 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 ATP1A1-AS1Q5TC04 95 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 THSD4Q6ZMP0 1018 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 ATCAYQ86WG3 371 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 PLCZ1Q86YW0 608 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 CYP4Z2PQ8N1L4 340 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 SLC43A2Q8N370 569 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 ZNF540Q8NDQ6 660 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 TMEM163Q8TC26 289 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 IPCEF1Q8WWN9 437 aaPredicted RBP11.86□□□□□ -0.51
PHGDH-221ENST00000641573 LIPHQ8WWY8 451 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 TAAR8Q969N4 342 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 IFT27Q9BW83 186 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 DUSP21Q9H596 190 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 PROK2Q9HC23 129 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 ANKRD10Q9NXR5 420 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 STMN3Q9NZ72 180 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 DNAJC27Q9NZQ0 273 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 ERVK-18Q9QC07 812 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 TEKT2Q9UIF3 430 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 TUBD1Q9UJT1 453 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 FBXL2Q9UKC9 423 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 VDAC3Q9Y277 283 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 HEATR5AQ86XA9 2040 aa11.86□□□□□ -0.51
PHGDH-221ENST00000641573 ZC3H12DA2A288 527 aaKnown RBP11.85□□□□□ -0.51
PHGDH-221ENST00000641573 ARGFXA6NJG6 315 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 A8MVM7 634 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 G3V3Y1 287 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 ETV2O00321 342 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-221ENST00000641573 BHLHE40O14503 412 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 SURF4O15260 269 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 ENTPD6O75354 484 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 NDUFB2O95178 105 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 P04436 131 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 HTR1AP08908 422 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 APOBEC1P41238 236 aaKnown RBP11.85□□□□□ -0.51
PHGDH-221ENST00000641573 CYB561P49447 251 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 SLC35A2P78381 396 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 LTBQ06643 244 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 PLPPR5Q32ZL2 321 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 SLC25A53Q5H9E4 307 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 SLC25A30Q5SVS4 291 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 ABHD17BQ5VST6 288 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 MDGA2Q7Z553 956 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 LNX2Q8N448 690 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 CLEC1AQ8NC01 280 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 STK35Q8TDR2 534 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 GGHQ92820 318 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 C1GALT1C1Q96EU7 318 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 TMEM41AQ96HV5 264 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 PLEKHA8Q96JA3 519 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 MRGPRX4Q96LA9 322 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 MOGAT1Q96PD6 335 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 NPAS1Q99742 590 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 RHNO1Q9BSD3 238 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 PTGES2Q9H7Z7 377 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 AMBNQ9NP70 447 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 CCNB1IP1Q9NPC3 277 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 NANSQ9NR45 359 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 SACM1LQ9NTJ5 587 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 ABI3Q9P2A4 366 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 PLEKHB1Q9UF11 243 aaPredicted RBP11.85□□□□□ -0.51
PHGDH-221ENST00000641573 PSORS1C1Q9UIG5 152 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 BAIAP2Q9UQB8 552 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 SNX5Q9Y5X3 404 aa11.85□□□□□ -0.51
PHGDH-221ENST00000641573 SHISA8B8ZZ34 492 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 NKX2-8O15522 239 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 RGS10O43665 173 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 NPIPB7O75200 414 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 SNX4O95219 450 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 PPP1R3DO95685 299 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 BGLAPP02818 100 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 RPS5P46782 204 aaKnown RBP11.84□□□□□ -0.51
PHGDH-221ENST00000641573 ALDH3B2P48448 385 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 MASP1P48740 699 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 OC90Q02509 493 aaPredicted RBP11.84□□□□□ -0.51
PHGDH-221ENST00000641573 NADK2Q4G0N4 442 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 C1orf140Q5VVS0 124 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 C1QL3Q5VWW1 255 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 MEDAGQ5VYS4 303 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 HIST2H2BCQ6DN03 193 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 C5orf46Q6UWT4 87 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 KCTD8Q6ZWB6 473 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 AHSA2Q719I0 299 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 BCDIN3DQ7Z5W3 292 aaKnown RBP11.84□□□□□ -0.51
PHGDH-221ENST00000641573 SPARTQ8N0X7 666 aa11.84□□□□□ -0.51
PHGDH-221ENST00000641573 OR1J4Q8NGS1 313 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms