RNA–Protein interactions for RNA: ENST00000641321.1

CASC19-222, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,173 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-222	ENST00000641321	SLC6A5	Q9Y345	797 aa		4.72	□□□□□ -1.65
CASC19-222	ENST00000641321	PTGDR2	Q9Y5Y4	395 aa		4.72	□□□□□ -1.65
CASC19-222	ENST00000641321	SPACA6	W5XKT8	324 aa		4.72	□□□□□ -1.65
CASC19-222	ENST00000641321	ALPK2	Q86TB3	2170 aa		4.71	□□□□□ -1.65
CASC19-222	ENST00000641321	TRAV34	A0A0B4J273	112 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	LOC100506127	A0A0U1RQW1	187 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321		A4D1N5	150 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PTGES3L	E9PB15	166 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	GFY	I3L273	518 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	CCL22	O00626	93 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	TP53I11	O14683	189 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	TRIM3	O75382	744 aa	Predicted RBP	4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	CAT	P04040	527 aa	Known RBP	4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	IFNA16	P05015	189 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	CSF1	P09603	554 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PRSS56	P0CW18	603 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	TMEM225B	P0DP42	221 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	ADRA1A	P35348	466 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PSMB10	P40306	273 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PITPNB	P48739	271 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	KLK7	P49862	253 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	BMX	P51813	675 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	ATP12A	P54707	1039 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	HILS1	P60008	231 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	RAE1	P78406	368 aa	Known RBP	4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	S100A12	P80511	92 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	RGS1	Q08116	209 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	LGALS3BP	Q08380	585 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	NPRL3	Q12980	569 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	CBFB	Q13951	182 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	BCL2A1	Q16548	175 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PGGHG	Q32M88	737 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	IGSF11	Q5DX21	431 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PIGG	Q5H8A4	983 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	DCST1	Q5T197	706 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	NCMAP	Q5T1S8	102 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	ATAD3B	Q5T9A4	648 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PTRHD1	Q6GMV3	140 aa	Known RBP	4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	CAVIN1	Q6NZI2	390 aa	Known RBP	4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	CASC4	Q6P4E1	433 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	CYP20A1	Q6UW02	462 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PLXDC2	Q6UX71	529 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	SLC43A2	Q8N370	569 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	ZNF740	Q8NDX6	193 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	SLC24A4	Q8NFF2	622 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	BBS1	Q8NFJ9	593 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	NUBPL	Q8TB37	319 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	WIPF2	Q8TF74	440 aa	Predicted RBP	4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	KCTD4	Q8WVF5	259 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	RHBDF1	Q96CC6	855 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	KTI12	Q96EK9	354 aa	Predicted RBP	4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	CHMP6	Q96FZ7	201 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	MED30	Q96HR3	178 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	TPD52L3	Q96J77	140 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PRAP1	Q96NZ9	151 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PIMREG	Q9BSJ6	248 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	SYT11	Q9BT88	431 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	TM2D2	Q9BX73	214 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	ITPA	Q9BY32	194 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	GBA3	Q9H227	469 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	HEATR1	Q9H583	2144 aa	Known RBP	4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	LRRC40	Q9H9A6	602 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PRTFDC1	Q9NRG1	225 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	ARL8B	Q9NVJ2	186 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	FAM120C	Q9NX05	1096 aa	Known RBP	4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	STX18	Q9P2W9	335 aa	Known RBP	4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	MYO6	Q9UM54	1294 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	CHMP2B	Q9UQN3	213 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	ZNF148	Q9UQR1	794 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	ERVK-19	Q9WJR5	959 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	B3GALT5	Q9Y2C3	310 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	TENM3	Q9P273	2699 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	PLCE1	Q9P212	2302 aa		4.71	□□□□□ -1.66
CASC19-222	ENST00000641321	COL7A1	Q02388	2944 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	PRR14L	Q5THK1	2151 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	hCG_1809904	A0A1W2PP81	198 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321		A0A1W2PPE2	198 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321		A0A1W2PR64	198 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	C5orf51	A6NDU8	294 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	SLC22A20	A6NK97	555 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	HACD1	B0YJ81	288 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321		H7C417	338 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	PRMT5	O14744	637 aa	Predicted RBP	4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	PIN1P1	O15428	100 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	NDUFS4	O43181	175 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	HCRTR2	O43614	444 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	OR1I1	O60431	355 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	CIB2	O75838	187 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	WDR47	O94967	919 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	TNFRSF1B	P20333	461 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	RRM2	P31350	389 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	PCGF2	P35227	344 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	CAPZA2	P47755	286 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	TMED10	P49755	219 aa	Known RBP	4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	PDLIM4	P50479	330 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	NAGLU	P54802	743 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	DYNLT1	P63172	113 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	CBX1	P83916	185 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	SRY	Q05066	204 aa		4.7	□□□□□ -1.66
CASC19-222	ENST00000641321	CSTF3	Q12996	717 aa	Known RBP	4.7	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms