RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 MFSD8Q8NHS3 518 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 SSC4DQ8WTU2 575 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 CANT1Q8WVQ1 401 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 TMEM239Q8WW34 195 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 ZHX1-C8orf76Q96EF9 292 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 MOGAT1Q96PD6 335 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 EPYCQ99645 322 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 PIP5K1AQ99755 562 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 PSD2Q9BQI7 771 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 MAGIXQ9H6Y5 334 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 NMNAT1Q9HAN9 279 aaPredicted RBP11.78□□□□□ -0.52
GTF3A-209ENST00000640289 ING1Q9UK53 422 aaPredicted RBP11.78□□□□□ -0.52
GTF3A-209ENST00000640289 TESMINQ9Y4I5 508 aa11.78□□□□□ -0.52
GTF3A-209ENST00000640289 A0A1W2PNV4 684 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 TCRBV3S1A0A5B6 114 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 DHRS12A0PJE2 317 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 DNPH1O43598 174 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 OR2T1O43869 369 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 CYTIPO60759 359 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 CH25HO95992 272 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 PLGP00747 810 aaPredicted RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 H1F0P07305 194 aaKnown RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 BMP5P22003 454 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 CTSSP25774 331 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 RBM34P42696 430 aaKnown RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 KIR2DL2P43627 348 aaPredicted RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 P2RY4P51582 365 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 H3F3AP84243 136 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 SPIBQ01892 262 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 RASGEF1BQ0VAM2 473 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 GUSBP1Q15486 140 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 FAM98BQ52LJ0 330 aaKnown RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 OTUD3Q5T2D3 398 aaPredicted RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 C1orf146Q5VVC0 180 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 OR2A2Q6IF42 318 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 VWA1Q6PCB0 445 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 TBPL2Q6SJ96 375 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 PIWIL3Q7Z3Z3 882 aaKnown RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 YTHDF3Q7Z739 585 aaKnown RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 TUSC5Q8IXB3 177 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF808Q8N4W9 903 aaPredicted RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 C10orf53Q8N6V4 93 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 CNEP1R1Q8N9A8 125 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF775Q96BV0 537 aaPredicted RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 GMPPAQ96IJ6 420 aaPredicted RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 HS6ST2Q96MM7 605 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 ZFP3Q96NJ6 502 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 NAA11Q9BSU3 229 aaPredicted RBP11.77□□□□□ -0.53
GTF3A-209ENST00000640289 C20orf141Q9NUB4 165 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 COQ3Q9NZJ6 369 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 AURKCQ9UQB9 309 aa11.77□□□□□ -0.53
GTF3A-209ENST00000640289 PRRC2CQ9Y520 2896 aaKnown RBP11.76□□□□□ -0.53
GTF3A-209ENST00000640289 A0A087WUU8 490 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 TRBV4-1A0A0J9YWV2 114 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 AQP7P3A6NL99 342 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 FAM90A27PA6NNH2 459 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 ENO4A6NNW6 628 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF716A6NP11 495 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 M0R082 166 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 EIF1BO60739 113 aaKnown RBP11.76□□□□□ -0.53
GTF3A-209ENST00000640289 FZD7O75084 574 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
GTF3A-209ENST00000640289 CIB2O75838 187 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 TNFSF13O75888 250 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 RAP2AP10114 183 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 GTF2E2P29084 291 aaKnown RBP11.76□□□□□ -0.53
GTF3A-209ENST00000640289 CHRNB4P30926 498 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 RRM2P31350 389 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 CCNIQ14094 377 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 RNPS1Q15287 305 aaKnown RBP11.76□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF74Q16587 644 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 FGD3Q5JSP0 725 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 GTF2IRD2BQ6EKJ0 949 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 PODNL1Q6PEZ8 512 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 PAQR6Q6TCH4 344 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 SLC46A3Q7Z3Q1 461 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 GTF2IRD2Q86UP8 949 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 MEX3DQ86XN8 651 aaKnown RBP11.76□□□□□ -0.53
GTF3A-209ENST00000640289 SLC43A2Q8N370 569 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 KDM8Q8N371 416 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 LRRC17Q8N6Y2 441 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 RELL2Q8NC24 303 aaPredicted RBP11.76□□□□□ -0.53
GTF3A-209ENST00000640289 OR6S1Q8NH40 331 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF417Q8TAU3 575 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 SLC7A13Q8TCU3 470 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 ASB5Q8WWX0 329 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 DHRS1Q96LJ7 313 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 ZNF587Q96SQ5 575 aaPredicted RBP11.76□□□□□ -0.53
GTF3A-209ENST00000640289 CHID1Q9BWS9 393 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 SLC19A3Q9BZV2 496 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 UCK2Q9BZX2 261 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 C6orf203Q9P0P8 240 aaPredicted RBP11.76□□□□□ -0.53
GTF3A-209ENST00000640289 KLHL9Q9P2J3 617 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 MED31Q9Y3C7 131 aa11.76□□□□□ -0.53
GTF3A-209ENST00000640289 A0A1W2PRQ8 180 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 NKX2-6A6NCS4 301 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 GADD45GO95257 159 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 CRHP06850 196 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 UMPSP11172 480 aa11.75□□□□□ -0.53
GTF3A-209ENST00000640289 IFI30P13284 250 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms