RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 RHBGQ9H310 441 aa2.53□□□□□ -2
CCDC7-216ENST00000640058 AATFQ9NY61 560 aaKnown RBP eCLIP2.53□□□□□ -2
CCDC7-216ENST00000640058 TMCC3Q9ULS5 477 aa2.53□□□□□ -2
CCDC7-216ENST00000640058 AIREO43918 545 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 TPST2O60704 377 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 UGT2B17O75795 530 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 LALBAP00709 142 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 UGT2B4P06133 528 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 ZNF286BP0CG31 522 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 CRISP2P16562 243 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 LAP3P28838 519 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 P2RY1P47900 373 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 IFNAR2P48551 515 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 PLK1P53350 603 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 C1orf61Q13536 156 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 MXD4Q14582 209 aaPredicted RBP2.52□□□□□ -2.01
CCDC7-216ENST00000640058 RALGPS2Q86X27 583 aaPredicted RBP2.52□□□□□ -2.01
CCDC7-216ENST00000640058 SVOPLQ8N434 492 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 KIR3DL3Q8N743 410 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 CATSPER1Q8NEC5 780 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 OR51G2Q8NGK0 314 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 OR2L8Q8NGY9 312 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 DEDD2Q8WXF8 326 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 CTNNBL1Q8WYA6 563 aaPredicted RBP2.52□□□□□ -2.01
CCDC7-216ENST00000640058 COQ2Q96H96 371 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 SH3YL1Q96HL8 342 aaPredicted RBP2.52□□□□□ -2.01
CCDC7-216ENST00000640058 TGM7Q96PF1 710 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 ZNF670Q9BS34 389 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 SLC35A5Q9BS91 424 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 NT5C3AQ9H0P0 336 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 TPK1Q9H3S4 243 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 EML4Q9HC35 981 aaKnown RBP2.52□□□□□ -2.01
CCDC7-216ENST00000640058 UFSP2Q9NUQ7 469 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 NUDT15Q9NV35 164 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 SMOXQ9NWM0 555 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 EXTL2Q9UBQ6 330 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 WARS2Q9UGM6 360 aaKnown RBP2.52□□□□□ -2.01
CCDC7-216ENST00000640058 TBK1Q9UHD2 729 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 PCSK1NQ9UHG2 260 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 AK6Q9Y3D8 172 aaKnown RBP2.52□□□□□ -2.01
CCDC7-216ENST00000640058 ALG6Q9Y672 507 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 FRMPD3Q5JV73 1810 aa2.52□□□□□ -2.01
CCDC7-216ENST00000640058 PHF3Q92576 2039 aaKnown RBP2.51□□□□□ -2.01
CCDC7-216ENST00000640058 KIF16BQ96L93 1317 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 H0YCG3 227 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 ARPC3O15145 178 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 HCRTR1O43613 425 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 PRKYO43930 277 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 RHOBTB1O94844 696 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 P04436 131 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 CAPN1P07384 714 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 RBMY1CP0DJD4 496 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 IGFBP3P17936 291 aaPredicted RBP2.51□□□□□ -2.01
CCDC7-216ENST00000640058 CALB2P22676 271 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 GLRA2P23416 452 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 PRKXP51817 358 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 GBX2P52951 348 aaPredicted RBP2.51□□□□□ -2.01
CCDC7-216ENST00000640058 RPS14P62263 151 aaKnown RBP2.51□□□□□ -2.01
CCDC7-216ENST00000640058 SELENOTP62341 195 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 TGFBR3Q03167 851 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 CHIT1Q13231 466 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 GANABQ14697 944 aaKnown RBP2.51□□□□□ -2.01
CCDC7-216ENST00000640058 NRF1Q16656 503 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 DEFB116Q30KQ4 102 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 CCDC152Q4G0S7 254 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 CFAP157Q5JU67 520 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 ACOT1Q86TX2 421 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 TPRA1Q86W33 373 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 MFSD6LQ8IWD5 586 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 TTC5Q8N0Z6 440 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 NKAPP1Q8N9T2 125 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 STXBP6Q8NFX7 210 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 OR10G2Q8NGC3 310 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 OR4D9Q8NGE8 314 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 OR4D5Q8NGN0 318 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 OR6X1Q8NH79 312 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 TRMT10AQ8TBZ6 339 aaKnown RBP2.51□□□□□ -2.01
CCDC7-216ENST00000640058 TUBGCP2Q9BSJ2 902 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 NAT10Q9H0A0 1025 aaKnown RBP2.51□□□□□ -2.01
CCDC7-216ENST00000640058 ZNF385DQ9H6B1 395 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 RAB18Q9NP72 206 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 SMPD3Q9NY59 655 aaPredicted RBP2.51□□□□□ -2.01
CCDC7-216ENST00000640058 RPH3ALQ9UNE2 315 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 SNX6Q9UNH7 406 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 MAD1L1Q9Y6D9 718 aa2.51□□□□□ -2.01
CCDC7-216ENST00000640058 PLEKHH1Q9ULM0 1364 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 LAD1O00515 517 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 PRRG1O14668 218 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 RS1O15537 224 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 GMFGO60234 142 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 SPAG7O75391 227 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 ECI2O75521 394 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 GNA14O95837 355 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 ATP6V1B2P21281 511 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 PTGDSP41222 190 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 CASP4P49662 377 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 BIDP55957 195 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 TAS2R19P59542 299 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 UBE2HP62256 183 aa2.5□□□□□ -2.01
CCDC7-216ENST00000640058 IL24Q13007 206 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms