RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 CCDC36Q8IYA8 594 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 NEK11Q8NG66 645 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 OR4K5Q8NGD3 323 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 OR2G3Q8NGZ4 309 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 P3H4Q92791 437 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 EMG1Q92979 244 aaKnown RBP-1□□□□□ -2.57
LMBR1-222ENST00000638959 HIST1H2ACQ93077 130 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 RAB39BQ96DA2 213 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 AURKBQ96GD4 344 aaPredicted RBP-1□□□□□ -2.57
LMBR1-222ENST00000638959 C1orf50Q9BV19 199 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 LINC00597Q9H2U6 94 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 DUSP21Q9H596 190 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 SYNDIG1Q9H7V2 258 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 ACOXLQ9NUZ1 547 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 QPCTLQ9NXS2 382 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 NSMCE4AQ9NXX6 385 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 MIOXQ9UGB7 285 aa-1□□□□□ -2.57
LMBR1-222ENST00000638959 EIF3LQ9Y262 564 aaKnown RBP-1□□□□□ -2.57
LMBR1-222ENST00000638959 IGHV1OR21-1A0A087WYE8 117 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 HSFX4A0A1B0GTS1 333 aaPredicted RBP-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 HSFX3A0A1B0GWH4 333 aaPredicted RBP-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 CIB4A0PJX0 185 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 SIGLEC16A6NMB1 481 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 D6RAR5 112 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 G3V4G9 280 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 ARPC1BO15143 372 aaKnown RBP-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 ST8SIA3O43173 380 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 FSTL3O95633 263 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 CENPBP07199 599 aaPredicted RBP-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 HEXBP07686 556 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 BCKDHAP12694 445 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 ABOP16442 354 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 TBXA2RP21731 343 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 CD80P33681 288 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 SOAT1P35610 550 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 ZP4Q12836 540 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 CYTH1Q15438 398 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 SLC9A3R2Q15599 337 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 ZBED5Q49AG3 693 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 PLBD1Q6P4A8 553 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 LEG1Q6P5S2 330 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 CES3Q6UWW8 571 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 ERN2Q76MJ5 926 aaKnown RBP-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 GET4Q7L5D6 327 aaPredicted RBP-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 TMEM126BQ8IUX1 230 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 THNSL1Q8IYQ7 743 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 OR1N2Q8NGR9 330 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 OR8U1Q8NH10 309 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 VPS33AQ96AX1 596 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 FLYWCH2Q96CP2 140 aaKnown RBP-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 DEFB118Q96PH6 123 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 NAA11Q9BSU3 229 aaPredicted RBP-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 MRPL37Q9BZE1 423 aaKnown RBP-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 DDX19AQ9NUU7 478 aaKnown RBP-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 FAM206AQ9NX38 181 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 GHRLQ9UBU3 117 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 MORF4L1Q9UBU8 362 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 FOXJ3Q9UPW0 622 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 AMMECR1Q9Y4X0 333 aaPredicted RBP-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 ADAMTS13Q76LX8 1427 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 PTPRUQ92729 1446 aa-1.01□□□□□ -2.57
LMBR1-222ENST00000638959 IGHV3-74A0A0B4J1X5 117 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 PP2D1A8MPX8 630 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 MFNGO00587 321 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 RASGRF2O14827 1237 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 CASKO14936 926 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 STK17BO94768 372 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 GGPS1O95749 300 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 HSPA4LO95757 839 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 SFTPBP07988 381 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 SERPINF2P08697 491 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 FCARP24071 287 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 ATP5A1P25705 553 aaKnown RBP-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 ACTN2P35609 894 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 MAGEA3P43357 314 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 MAGEA5P43359 124 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 SRP54P61011 504 aaKnown RBP-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 ARG2P78540 354 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 CAMK2DQ13557 499 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 VGLL4Q14135 290 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 SNRNP35Q16560 246 aaKnown RBP-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 NSUN5P1Q3KNT7 163 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 KRBOX4Q5JUW0 171 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 FAM205BPQ63HN1 556 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 HIST2H2AA3Q6FI13 130 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 ZFAND6Q6FIF0 208 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 SLC39A4Q6P5W5 647 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 H2AFVQ71UI9 128 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 GRAMD2AQ8IUY3 354 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 MISPQ8IVT2 679 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 NUP93Q8N1F7 819 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 C15orf40Q8WUR7 153 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 CITED1Q99966 193 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 TREX2Q9BQ50 279 aaPredicted RBP-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 TMEM246Q9BRR3 403 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 TTTY12Q9BZ98 90 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 NAPBQ9H115 298 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 SRD5A3Q9H8P0 318 aa-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 WARS2Q9UGM6 360 aaKnown RBP-1.02□□□□□ -2.57
LMBR1-222ENST00000638959 YARS2Q9Y2Z4 477 aaKnown RBP-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms