RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 KIAA0513O60268 411 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 PRKD3O94806 890 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 GOSR1O95249 250 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 SERPINA1P01009 418 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 CHRM4P08173 479 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 ADH6P28332 368 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 PCGF2P35227 344 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 CLK3P49761 638 aaKnown RBP6.96□□□□□ -1.3
PNKP-229ENST00000637897 FOXG1P55316 489 aaPredicted RBP6.96□□□□□ -1.3
PNKP-229ENST00000637897 RPS3AP61247 264 aaKnown RBP6.96□□□□□ -1.3
PNKP-229ENST00000637897 EEF1A1P68104 462 aaKnown RBP6.96□□□□□ -1.3
PNKP-229ENST00000637897 TXNL4AP83876 142 aaKnown RBP6.96□□□□□ -1.3
PNKP-229ENST00000637897 CHRNEQ04844 493 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 RBBP4Q09028 425 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 QPRTQ15274 297 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 RGNQ15493 299 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 GPR68Q15743 365 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 SGCBQ16585 318 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 NRF1Q16656 503 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 EXOC3L2Q2M3D2 409 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 TMEM176BQ3YBM2 270 aaPredicted RBP6.96□□□□□ -1.3
PNKP-229ENST00000637897 COX20Q5RI15 118 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 EEF1A1P5Q5VTE0 462 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 HBMQ6B0K9 141 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 TNFAIP8L2Q6P589 184 aaPredicted RBP6.96□□□□□ -1.3
PNKP-229ENST00000637897 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.96□□□□□ -1.3
PNKP-229ENST00000637897 MISPQ8IVT2 679 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 SLC30A8Q8IWU4 369 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 SVOPLQ8N434 492 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 CBR4Q8N4T8 237 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 C11orf65Q8NCR3 313 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 OR5W2Q8NH69 310 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 NEUROG1Q92886 237 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 NEURL3Q96EH8 262 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 PIK3IP1Q96FE7 263 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 PYURFQ96I23 114 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 ARL5BQ96KC2 179 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 ZNF300Q96RE9 604 aaPredicted RBP6.96□□□□□ -1.3
PNKP-229ENST00000637897 PSD2Q9BQI7 771 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 SLC35A5Q9BS91 424 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 LAT2Q9GZY6 243 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 SLC38A1Q9H2H9 487 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 C12orf49Q9H741 205 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 OAZ3Q9UMX2 235 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 GNGT2O14610 69 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 AP3D1O14617 1153 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 ZNF264O43296 627 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 TNFAIP8O95379 198 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 HPRP00739 348 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 CST1P01037 141 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 IFNA14P01570 189 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 THBS1P07996 1170 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 GUSBP08236 651 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 UBTFL6P0CB48 400 aaPredicted RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 ZNF23P17027 643 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 PSMB1P20618 241 aaKnown RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 RPS4Y1P22090 263 aaKnown RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 UQCRC2P22695 453 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 ELK4P28324 431 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 KDELR2P33947 212 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 SOAT1P35610 550 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 CHI3L1P36222 383 aaPredicted RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 MAGEA8P43361 318 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 ZNF41P51814 821 aaPredicted RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 SUMO3P55854 103 aaPredicted RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 CARD18P57730 90 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 KEAP1Q14145 624 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 FGFBP1Q14512 234 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 ADRM1Q16186 407 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 SYPL1Q16563 259 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 ACKR1Q16570 336 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 C6orf52Q5T4I8 152 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 GCNT6Q5T4J0 391 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 UGT2A3Q6UWM9 527 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 PLEKHM3Q6ZWE6 761 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 Q71RC1 249 aaPredicted RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 EIF3MQ7L2H7 374 aaKnown RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 CHMP1BQ7LBR1 199 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 ADGRG3Q86Y34 549 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 PTOV1Q86YD1 416 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 ZDHHC13Q8IUH4 622 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 EPHX4Q8IUS5 362 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 C10orf111Q8N326 155 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 ATP6V1C2Q8NEY4 427 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 CNOT9Q92600 299 aaKnown RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 ZNF775Q96BV0 537 aaPredicted RBP6.95□□□□□ -1.3
PNKP-229ENST00000637897 DNAJA3Q96EY1 480 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 LRRC46Q96FV0 321 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 SLC35G5Q96KT7 338 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 MRGPRX4Q96LA9 322 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 RDH12Q96NR8 316 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 SLC29A1Q99808 456 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 MED18Q9BUE0 208 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 OSBPL10Q9BXB5 764 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 ANKRD60Q9BZ19 345 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 HOXD1Q9GZZ0 328 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 TMEM38AQ9H6F2 299 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 BCO1Q9HAY6 547 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 ADPRHL2Q9NX46 363 aa6.95□□□□□ -1.3
PNKP-229ENST00000637897 KLHL13Q9P2N7 655 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms