RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PRKYO43930 277 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 NEURL1O76050 574 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 PIPP12273 146 aaPredicted RBP13.88□□□□□ -0.19
CLN6-219ENST00000637329 APEHP13798 732 aaKnown RBP13.88□□□□□ -0.19
CLN6-219ENST00000637329 NR1H2P55055 460 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 MFAP5Q13361 173 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 POMZP3Q6PJE2 187 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 THSD4Q6ZMP0 1018 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 DPY19L2P2Q6ZN68 376 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 C10orf53Q8N6V4 93 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 TCEANCQ8N8B7 351 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 OR51A7Q8NH64 312 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 SNIP1Q8TAD8 396 aaKnown RBP13.88□□□□□ -0.19
CLN6-219ENST00000637329 POC1BQ8TC44 478 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 FGF11Q92914 225 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 UBE2FQ969M7 185 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 TAAR8Q969N4 342 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 TNFRSF13CQ96RJ3 184 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 FAM173AQ9BQD7 235 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 IFT27Q9BW83 186 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 POTEKPQ9BYX7 375 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 VCX3AQ9NNX9 186 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 CMC2Q9NRP2 79 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 FKBP14Q9NWM8 211 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 GPR83Q9NYM4 423 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 DKKL1Q9UK85 242 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 BOKQ9UMX3 212 aaPredicted RBP13.88□□□□□ -0.19
CLN6-219ENST00000637329 MRPS18CQ9Y3D5 142 aaKnown RBP13.88□□□□□ -0.19
CLN6-219ENST00000637329 CORINQ9Y5Q5 1042 aa13.88□□□□□ -0.19
CLN6-219ENST00000637329 OR5H15A6NDH6 313 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 EFCAB10A6NFE3 127 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 CLCA1A8K7I4 914 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 KDM4EB2RXH2 506 aaPredicted RBP13.87□□□□□ -0.19
CLN6-219ENST00000637329 XPNPEP2O43895 674 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 SMNDC1O75940 238 aaKnown RBP eCLIP13.87□□□□□ -0.19
CLN6-219ENST00000637329 IFNGP01579 166 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 HIST1H2ABP04908 130 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 PRKAR1AP10644 381 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 PEPDP12955 493 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 CNR1P21554 472 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 DPP4P27487 766 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 SRD5A2P31213 254 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 CD96P40200 585 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 RPL5P46777 297 aaKnown RBP13.87□□□□□ -0.19
CLN6-219ENST00000637329 RPS5P46782 204 aaKnown RBP13.87□□□□□ -0.19
CLN6-219ENST00000637329 OR1C1Q15619 314 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 SGCBQ16585 318 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 SMN1Q16637 294 aaKnown RBP13.87□□□□□ -0.19
CLN6-219ENST00000637329 SYT14P1Q58G82 188 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 HIST3H2AQ7L7L0 130 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 SCAIQ8N9R8 606 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 ZNF540Q8NDQ6 660 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 MFSD8Q8NHS3 518 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 HIST1H2ACQ93077 130 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 RFKQ969G6 155 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 LRR1Q96L50 414 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 MOGAT1Q96PD6 335 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 BBC3Q96PG8 261 aaPredicted RBP13.87□□□□□ -0.19
CLN6-219ENST00000637329 IL4I1Q96RQ9 567 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 UBL7Q96S82 380 aaPredicted RBP13.87□□□□□ -0.19
CLN6-219ENST00000637329 ANKRD10Q9NXR5 420 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 PSORS1C1Q9UIG5 152 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 KLHL21Q9UJP4 597 aa13.87□□□□□ -0.19
CLN6-219ENST00000637329 ZC3H12DA2A288 527 aaKnown RBP13.86□□□□□ -0.19
CLN6-219ENST00000637329 LRRC3CA6NJW4 275 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 RIIAD1A6NNX1 92 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 FTCDNL1E5RQL4 147 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 IMPA2O14732 288 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 ARPC3O15145 178 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 NKX2-8O15522 239 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 PRODHO43272 600 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 WDPCPO95876 746 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 ATP6V1B1P15313 513 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 ZNF3P17036 446 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 WT1P19544 449 aaPredicted RBP13.86□□□□□ -0.19
CLN6-219ENST00000637329 CCNA2P20248 432 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 IDUAP35475 653 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 CDH15P55291 814 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 INPP5JQ15735 1006 aaPredicted RBP13.86□□□□□ -0.19
CLN6-219ENST00000637329 NXNL2Q5VZ03 156 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 PRSS48Q7RTY5 328 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 GID4Q8IVV7 300 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 SVOPQ8N4V2 548 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 LRRC17Q8N6Y2 441 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 ADPRHL1Q8NDY3 354 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 MDS2Q8NDY4 140 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 OR5J2Q8NH18 312 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 MYDGFQ969H8 173 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 SIGLEC11Q96RL6 698 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 PIGQQ9BRB3 760 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 ASPNQ9BXN1 380 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 ZFP64Q9NPA5 681 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 NRIP3Q9NQ35 241 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 PAK1IP1Q9NWT1 392 aaPredicted RBP13.86□□□□□ -0.19
CLN6-219ENST00000637329 MRPL39Q9NYK5 338 aaKnown RBP13.86□□□□□ -0.19
CLN6-219ENST00000637329 B4GALT7Q9UBV7 327 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 IL20RAQ9UHF4 553 aa13.86□□□□□ -0.19
CLN6-219ENST00000637329 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.86□□□□□ -0.19
CLN6-219ENST00000637329 KLF13Q9Y2Y9 288 aaPredicted RBP13.86□□□□□ -0.19
CLN6-219ENST00000637329 RPL36Q9Y3U8 105 aaKnown RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms