RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 ADAM19Q9H013 955 aa16.9■□□□□ 0.3
CLN8-211ENST00000636934 PPP1R3EQ9H7J1 279 aa16.9■□□□□ 0.3
CLN8-211ENST00000636934 KLHL1Q9NR64 748 aa16.9■□□□□ 0.3
CLN8-211ENST00000636934 FGF21Q9NSA1 209 aa16.9■□□□□ 0.3
CLN8-211ENST00000636934 ST6GALNAC2Q9UJ37 374 aa16.9■□□□□ 0.3
CLN8-211ENST00000636934 TP53BP1Q12888 1972 aaPredicted RBP16.9■□□□□ 0.3
CLN8-211ENST00000636934 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.89■□□□□ 0.3
CLN8-211ENST00000636934 A8MU76 341 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 FAM25AB3EWG3 89 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 FAM25CB3EWG5 89 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 FAM25GB3EWG6 89 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 BLOC1S5-TXNDC5H3BN57 136 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 ICOSLGO75144 302 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 ARL6IP5O75915 188 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 TFP02787 698 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 TALDO1P37837 337 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 RFX2P48378 723 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 TMED10P49755 219 aaKnown RBP16.89■□□□□ 0.3
CLN8-211ENST00000636934 CD300CQ08708 224 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 ACSM3Q53FZ2 586 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 ALG10Q5BKT4 473 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 MZT2BQ6NZ67 158 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 CBLN3Q6UW01 205 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 APOOLQ6UXV4 268 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 LRRC28Q86X40 367 aaPredicted RBP16.89■□□□□ 0.3
CLN8-211ENST00000636934 Q8N402 240 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 C17orf47Q8NEP4 570 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 OR5J2Q8NH18 312 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 MOSPD2Q8NHP6 518 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 PHYHIPQ92561 330 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 GHSRQ92847 366 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 ZNF501Q96CX3 271 aaPredicted RBP16.89■□□□□ 0.3
CLN8-211ENST00000636934 SMIM19Q96E16 107 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 PGLYRP3Q96LB9 341 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 UBL7Q96S82 380 aaPredicted RBP16.89■□□□□ 0.3
CLN8-211ENST00000636934 IER2Q9BTL4 223 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 WWTR1Q9GZV5 400 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 SACM1LQ9NTJ5 587 aa16.89■□□□□ 0.3
CLN8-211ENST00000636934 PCDH15Q96QU1 1955 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 TRAV1-2A0A0B4J238 106 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 OR6C68A6NDL8 312 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 ALG1L2C9J202 215 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 K7ESF4 209 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 PRKNO60260 465 aaPredicted RBP16.89■□□□□ 0.29
CLN8-211ENST00000636934 GPRIN2O60269 458 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 CDC40O60508 579 aaKnown RBP eCLIP16.89■□□□□ 0.29
CLN8-211ENST00000636934 TSPAN2O60636 221 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 SC5DO75845 299 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 GATBO75879 557 aaKnown RBP16.89■□□□□ 0.29
CLN8-211ENST00000636934 TXNDC12O95881 172 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 ASAH2BP0C7U1 165 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 IMPDH2P12268 514 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 PGCP20142 388 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 CXCR1P25024 350 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 SHC1P29353 583 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 TACR3P29371 465 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 SDHAP31040 664 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 ACVR1BP36896 505 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 AQP2P41181 271 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 NAA10P41227 235 aaPredicted RBP16.89■□□□□ 0.29
CLN8-211ENST00000636934 NR0B1P51843 470 aaKnown RBP16.89■□□□□ 0.29
CLN8-211ENST00000636934 PNLIPRP2P54317 469 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 SIRPAP78324 504 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 ZP2Q05996 745 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 SELENBP1Q13228 472 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 CDK5R1Q15078 307 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 TP53I3Q53FA7 332 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 VWA2Q5GFL6 755 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 LEG1Q6P5S2 330 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 NANOGNBQ7Z5D8 188 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 LSRQ86X29 649 aaPredicted RBP16.89■□□□□ 0.29
CLN8-211ENST00000636934 C9orf40Q8IXQ3 194 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 UBQLNLQ8IYU4 475 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 HAVCR2Q8TDQ0 301 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 RASD2Q96D21 266 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 ELF4Q99607 663 aaPredicted RBP16.89■□□□□ 0.29
CLN8-211ENST00000636934 TBL1XR1Q9BZK7 514 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 FKRPQ9H9S5 495 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 NCDNQ9UBB6 729 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 NPFFR2Q9Y5X5 522 aa16.89■□□□□ 0.29
CLN8-211ENST00000636934 TEX13CA0A0J9YWL9 993 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 HCRTR2O43614 444 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 NDUFB5O43674 189 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 PNLIPP16233 465 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 UQCRC1P31930 480 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 GDI2P50395 445 aaKnown RBP16.88■□□□□ 0.29
CLN8-211ENST00000636934 CTXN1P60606 82 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 ZNF117Q03924 483 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 GPR139Q6DWJ6 353 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 SFXN4Q6P4A7 337 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 SPATC1Q76KD6 591 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 SSX6Q7RTT6 188 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 RABEPKQ7Z6M1 372 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 LRRC75AQ8NAA5 344 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 OR6K6Q8NGW6 343 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 PELI1Q96FA3 418 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 DUSP23Q9BVJ7 150 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 SLC7A5P2Q9GIP4 190 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 VN1R1Q9GZP7 353 aa16.88■□□□□ 0.29
CLN8-211ENST00000636934 WDR70Q9NW82 654 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms