RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 C1orf162Q8NEQ5 155 aaPredicted RBP16.7■□□□□ 0.26
CLN6-213ENST00000636212 ELOA3Q8NG57 546 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 OR9K2Q8NGE7 335 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 OR52E4Q8NGH9 312 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 LILRB1Q8NHL6 650 aaPredicted RBP16.7■□□□□ 0.26
CLN6-213ENST00000636212 NFKBIDQ8NI38 313 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 STK35Q8TDR2 534 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 C3orf49Q96BT1 292 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 POM121Q96HA1 1249 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 MAGEB18Q96M61 343 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 ZNF607Q96SK3 696 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 CISD1Q9NZ45 108 aaKnown RBP16.7■□□□□ 0.26
CLN6-213ENST00000636212 SELENONQ9NZV5 590 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 SLC13A4Q9UKG4 626 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 TRIM33Q9UPN9 1127 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 MAGED1Q9Y5V3 778 aaPredicted RBP16.7■□□□□ 0.26
CLN6-213ENST00000636212 FRS3O43559 492 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 ARAFP10398 606 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 SLC6A2P23975 617 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 PTAFRP25105 342 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 ZNF83P51522 516 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 CDK6Q00534 326 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 LTBQ06643 244 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 ETFDHQ16134 617 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 GABRA6Q16445 453 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 C1QTNF12Q5T7M4 302 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 C17orf78Q8N4C9 275 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 BHLHE22Q8NFJ8 381 aaPredicted RBP16.69■□□□□ 0.26
CLN6-213ENST00000636212 CKAP2Q8WWK9 683 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 MUS81Q96NY9 551 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 SMR3AQ99954 134 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 TRIM2Q9C040 744 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 SLCO5A1Q9H2Y9 848 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 SLC25A37Q9NYZ2 338 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 RASD1Q9Y272 281 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 AMDHD2Q9Y303 409 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 FREM1Q5H8C1 2179 aa16.69■□□□□ 0.26
CLN6-213ENST00000636212 MAP1AP78559 2803 aaPredicted RBP16.68■□□□□ 0.26
CLN6-213ENST00000636212 PRORSD1PA6NEY8 169 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 OR6C65A6NJZ3 312 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 SERPINB7O75635 380 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 WNT11O96014 354 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 HEXAP06865 529 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 DANCRP0C864 163 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 HOXB9P17482 250 aaPredicted RBP16.68■□□□□ 0.26
CLN6-213ENST00000636212 MPGP29372 298 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 NTF4P34130 210 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 KRTAP21-3Q3LHN1 58 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 PAGE3Q5JUK9 113 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 TSPO2Q5TGU0 170 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 C9orf135Q5VTT2 229 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 AGAP6Q5VW22 663 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 SLC22A25Q6T423 547 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 C5orf46Q6UWT4 87 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 SEZ6L2Q6UXD5 910 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 Q71RC1 249 aaPredicted RBP16.68■□□□□ 0.26
CLN6-213ENST00000636212 ATG4DQ86TL0 474 aaPredicted RBP16.68■□□□□ 0.26
CLN6-213ENST00000636212 MFSD8Q8NHS3 518 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 STON2Q8WXE9 905 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 NEUROG1Q92886 237 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 SLC25A36Q96CQ1 311 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 C12orf10Q9HB07 376 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 SLC7A10Q9NS82 523 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 NPAP1Q9NZP6 1156 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 VAPAQ9P0L0 249 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 LEF1Q9UJU2 399 aaPredicted RBP16.68■□□□□ 0.26
CLN6-213ENST00000636212 SLC25A15Q9Y619 301 aa16.68■□□□□ 0.26
CLN6-213ENST00000636212 A0A1W2PR80 420 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 TRIM64A6NGJ6 449 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 TRIM64BA6NI03 449 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 M0R1B8 84 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 ANGPT2O15123 496 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 OR2T1O43869 369 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 SOD3P08294 240 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 ITGA5P08648 1049 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 SCARB2Q14108 478 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 DHRS4L2Q6PKH6 230 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 RNF217Q8TC41 542 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 DNAJA4Q8WW22 397 aaPredicted RBP16.67■□□□□ 0.26
CLN6-213ENST00000636212 SIKE1Q9BRV8 207 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 TMEM38AQ9H6F2 299 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 EVA1AQ9H8M9 152 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 SLAMF8Q9P0V8 285 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 ANGPT4Q9Y264 503 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 NDUFAF1Q9Y375 327 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 CHST2Q9Y4C5 530 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 GMEB1Q9Y692 573 aa16.67■□□□□ 0.26
CLN6-213ENST00000636212 TMEM229AB2RXF0 380 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 SHISA9B4DS77 424 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 OVOL3O00110 214 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 PNMTP11086 282 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 GPX2P18283 190 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 CDKN1AP38936 164 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 RPS5P46782 204 aaKnown RBP16.66■□□□□ 0.26
CLN6-213ENST00000636212 PRPS1P60891 318 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 HOXC5Q00444 222 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 CLEC12BQ2HXU8 276 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 MSRB3Q8IXL7 192 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 HIPK4Q8NE63 616 aa16.66■□□□□ 0.26
CLN6-213ENST00000636212 SLC38A4Q969I6 547 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms