RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 ADAM19Q9H013 955 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 POLR2J3Q9H1A7 115 aaKnown RBP13.06□□□□□ -0.32
LINC00339-208ENST00000634934 SMURF2Q9HAU4 748 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 QPCTLQ9NXS2 382 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 ERGIC3Q9Y282 383 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 PCNX3Q9H6A9 2034 aa13.06□□□□□ -0.32
LINC00339-208ENST00000634934 SPTA1P02549 2419 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 ELOA3DA6NLF2 546 aaPredicted RBP13.05□□□□□ -0.32
LINC00339-208ENST00000634934 NPIPA5E9PKD4 350 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 E2F6O75461 281 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 THY1P04216 161 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 H1F0P07305 194 aaKnown RBP13.05□□□□□ -0.32
LINC00339-208ENST00000634934 IGFBP5P24593 272 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 CXCR1P25024 350 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 RRM2P31350 389 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 HTR3AP46098 478 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 TPD52P55327 224 aaPredicted RBP13.05□□□□□ -0.32
LINC00339-208ENST00000634934 ST3GAL3Q11203 375 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 ZNF846Q147U1 533 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 CTF1Q16619 201 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 ELOA3BQ3SY89 546 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 GLYR1Q49A26 553 aaPredicted RBP13.05□□□□□ -0.32
LINC00339-208ENST00000634934 GTPBP8Q8N3Z3 284 aaPredicted RBP13.05□□□□□ -0.32
LINC00339-208ENST00000634934 ATP6V1C2Q8NEY4 427 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 ELOA3Q8NG57 546 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 FCGR1BQ92637 280 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 EPYCQ99645 322 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 FUNDC2Q9BWH2 189 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 GABARAPL3Q9BY60 117 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 NAA50Q9GZZ1 169 aaKnown RBP13.05□□□□□ -0.32
LINC00339-208ENST00000634934 SLC6A15Q9H2J7 730 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 LDAHQ9H6V9 325 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 EXO5Q9H790 373 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 ZDHHC11Q9H8X9 412 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 NMNAT1Q9HAN9 279 aaPredicted RBP13.05□□□□□ -0.32
LINC00339-208ENST00000634934 HMG20AQ9NP66 347 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 PLCXD1Q9NUJ7 323 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 CHCHD3Q9NX63 227 aaKnown RBP13.05□□□□□ -0.32
LINC00339-208ENST00000634934 SCN3BQ9NY72 215 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 OSGIN1Q9UJX0 560 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 ACAD8Q9UKU7 415 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 NPIPA1Q9UND3 350 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 MRPS18CQ9Y3D5 142 aaKnown RBP13.05□□□□□ -0.32
LINC00339-208ENST00000634934 A3GALT2U3KPV4 340 aa13.05□□□□□ -0.32
LINC00339-208ENST00000634934 COL6A6A6NMZ7 2263 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 PRRC2CQ9Y520 2896 aaKnown RBP13.04□□□□□ -0.32
LINC00339-208ENST00000634934 TMED7-TICAM2A0A0A6YYA0 188 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 OR2M5A3KFT3 312 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 ETV2O00321 342 aaPredicted RBP13.04□□□□□ -0.32
LINC00339-208ENST00000634934 CHP2O43745 196 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 NTN1O95631 604 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 PNMTP11086 282 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 ZNF182P17025 639 aaPredicted RBP13.04□□□□□ -0.32
LINC00339-208ENST00000634934 PTNP21246 168 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 FUT4P22083 530 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 APOBEC1P41238 236 aaKnown RBP13.04□□□□□ -0.32
LINC00339-208ENST00000634934 SMIM11AP58511 58 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 TRAM2Q15035 370 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 SLC25A53Q5H9E4 307 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 TMEM179BQ7Z7N9 219 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 ATG4DQ86TL0 474 aaPredicted RBP13.04□□□□□ -0.32
LINC00339-208ENST00000634934 GIPC3Q8TF64 312 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 FAR1Q8WVX9 515 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 RELTQ969Z4 430 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 YIPF6Q96EC8 236 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 PSD2Q9BQI7 771 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 ACKR4Q9NPB9 350 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 SERINC1Q9NRX5 453 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 SLC6A5Q9Y345 797 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 TMED7Q9Y3B3 224 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 MAGED1Q9Y5V3 778 aaPredicted RBP13.04□□□□□ -0.32
LINC00339-208ENST00000634934 LIPGQ9Y5X9 500 aa13.04□□□□□ -0.32
LINC00339-208ENST00000634934 CLDN25C9JDP6 229 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 ADAMDEC1O15204 470 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 GADD45GO95257 159 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 LYPD3O95274 346 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 OPN1LWP04000 364 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 PEPDP12955 493 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 ZNF17P17021 662 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 IL11P20809 199 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 ADH6P28332 368 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 SERPINB10P48595 397 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 GP2P55259 537 aaKnown RBP13.03□□□□□ -0.32
LINC00339-208ENST00000634934 B3GALT5-AS1P59052 145 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 PPP1R8Q12972 351 aaKnown RBP13.03□□□□□ -0.32
LINC00339-208ENST00000634934 TMED1Q13445 227 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 TMEM44Q2T9K0 475 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 ZNF605Q86T29 641 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 ADGRG3Q86Y34 549 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 NKAIN4Q8IVV8 208 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 SMPDL3BQ92485 455 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 SLC38A4Q969I6 547 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 ITFG2Q969R8 447 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 TMEM185BQ9H7F4 350 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 REEP1Q9H902 201 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 AKIP1Q9NQ31 210 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 CHRNA9Q9UGM1 479 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 ZNF337Q9Y3M9 751 aa13.03□□□□□ -0.32
LINC00339-208ENST00000634934 SAMHD1Q9Y3Z3 626 aaKnown RBP13.03□□□□□ -0.32
LINC00339-208ENST00000634934 U3KQV3 271 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms