RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 LACC1Q8IV20 430 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 PSTKQ8IV42 348 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 CNPY4Q8N129 248 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM178AQ8NBL3 297 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 MINDY2Q8NBR6 621 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 OR10V1Q8NGI7 309 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 CXorf40AQ8TE69 158 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC37A2Q8TED4 501 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 PIH1D2Q8WWB5 315 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 STARD8Q92502 1023 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 ART4Q93070 314 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 HIST1H2ACQ93077 130 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 TADA1Q96BN2 335 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 MRPL53Q96EL3 112 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 C16orf58Q96GQ5 468 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 C2orf48Q96LS8 159 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF599Q96NL3 588 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 ERGIC2Q96RQ1 377 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 AGPAT1Q99943 283 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 C11orf70Q9BRQ4 267 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 CNPY3Q9BT09 278 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 SNRNP25Q9BV90 132 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 FUNDC2Q9BWH2 189 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 PAPOLGQ9BWT3 736 aaKnown RBP2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 HOXD1Q9GZZ0 328 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 DPH5Q9H2P9 285 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 S100A14Q9HCY8 104 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 APMAPQ9HDC9 416 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 FBXO8Q9NRD0 319 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC35D1Q9NTN3 355 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 ETNK2Q9NVF9 386 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 COPS7AQ9UBW8 275 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 ENTPD4Q9Y227 616 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 TP53TG5Q9Y2B4 290 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 U3KQV3 271 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 CACNA1DQ01668 2161 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 DOCK10Q96BY6 2186 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 PIKFYVEQ9Y2I7 2098 aa2.1□□□□□ -2.07
SMARCB1-208ENST00000634926 SPTBP11277 2137 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 SEC16AO15027 2179 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 CACNA1CQ13936 2221 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 A0A087WW49 117 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 A0A0J9YYE9 177 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 A0A1W2PQ67 120 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 PMS2P5A8MQ11 134 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 GOLGA8SH3BPF8 625 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 E2F3O00716 465 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 ANGPT2O15123 496 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 SURF4O15260 269 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TOX3O15405 576 aaPredicted RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 BUB1O43683 1085 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 PEX11AO75192 247 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 LRCH4O75427 683 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 SYNGR4O95473 234 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 DIRAS3O95661 229 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TNFP01375 233 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TRBC1P01850 177 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 KRT6BP04259 564 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 CAPN1P07384 714 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 CD48P09326 243 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TPBGLP0DKB5 382 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 CTSEP14091 401 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF30P17039 623 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 C4BPBP20851 252 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 ANOS1P23352 680 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 IL4RP24394 825 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 EDNRAP25101 427 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 GIFP27352 417 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 PRDX6P30041 224 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 PKLRP30613 574 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 RORAP35398 523 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 MAGEA4P43358 317 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC6A8P48029 635 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 KRT6CP48668 564 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 HCAR3P49019 387 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 GFERP55789 205 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 XGP55808 180 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 LINC01547P58512 204 aaPredicted RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 PHEXP78562 749 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC10A7Q0GE19 358 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 KLRB1Q12918 225 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 SNX1Q13596 522 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 EXOSC7Q15024 291 aaKnown RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF658BQ4V348 819 aaPredicted RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 PRR30Q53SZ7 412 aaPredicted RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 CMPK2Q5EBM0 449 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 C1orf189Q5VU69 101 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TAF3Q5VWG9 929 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 IL23RQ5VWK5 629 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 LRRC66Q68CR7 880 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 FAM53AQ6NSI3 398 aaPredicted RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 RWDD4Q6NW29 188 aaKnown RBP2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 ARSKQ6UWY0 536 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM26Q6ZUK4 368 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 Q6ZVQ6 151 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 TMEM135Q86UB9 458 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 SLC22A16Q86VW1 577 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 AMZ2Q86W34 360 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 ZNF547Q8IVP9 402 aa2.09□□□□□ -2.07
SMARCB1-208ENST00000634926 DND1Q8IYX4 353 aaKnown RBP2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms