RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 PSG6Q00889 435 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 CD300CQ08708 224 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 CLN3Q13286 438 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 TMEM201Q5SNT2 666 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 C12orf73Q69YU5 71 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 BICRALQ6AI39 1079 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 ZNF544Q6NX49 715 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 ASB18Q6ZVZ8 466 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 SCAIQ8N9R8 606 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 PSD4Q8NDX1 1056 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 VSTM2LQ96N03 204 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 OR5M11Q96RB7 305 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 ZNF559Q9BR84 538 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 DNAJC27Q9NZQ0 273 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 DNAJC13O75165 2243 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 NPIPA5E9PKD4 350 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 RAB36O95755 333 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 IL33O95760 270 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 OR2B6P58173 313 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 PSPHP78330 225 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 SSX1Q16384 188 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 MINDY2Q8NBR6 621 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 UFD1Q92890 307 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 NPIPA1Q9UND3 350 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 POLR1DQ9Y2S0 133 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 LRP4O75096 1905 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 A0A1W2PRQ8 180 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 OR5H15A6NDH6 313 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 C1QTNF9BB2RNN3 333 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 BLOC1S5-TXNDC5H3BN57 136 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 SYNGR4O95473 234 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 C1QTNF9P0C862 333 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 POU3F2P20265 443 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 GALNSP34059 522 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 COL28A1Q2UY09 1125 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 PODNL1Q6PEZ8 512 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 SLC22A16Q86VW1 577 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 OR5M1Q8NGP8 315 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 OR5B2Q96R09 309 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 MGLLQ99685 303 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 GPA33Q99795 319 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 PRR14Q9BWN1 585 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 POLE3Q9NRF9 147 aa11.37□□□□□ -0.59
SYNGAP1-207ENST00000628646 RGS6P49758 472 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 CDH11P55287 796 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 PPIAP62937 165 aaKnown RBP11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 KLHL12Q53G59 568 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 PGBD2Q6P3X8 592 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 GDPGP1Q6ZNW5 385 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 MISPQ8IVT2 679 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 GID4Q8IVV7 300 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 OR2T33Q8NG76 320 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 TTC9Q92623 222 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 SLC41A3Q96GZ6 507 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 CENPOQ9BU64 300 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 OR51E2Q9H255 320 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 CHST2Q9Y4C5 530 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 HCN1O60741 890 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 LGI1O95970 557 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 GAS1P54826 345 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 RPS3AP61247 264 aaKnown RBP11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 ZNF404Q494X3 552 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 TMEM225Q6GV28 225 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 NANOGNBQ7Z5D8 188 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 SLC7A13Q8TCU3 470 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 IFT27Q9BW83 186 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 SNX4O95219 450 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 PIPP12273 146 aaPredicted RBP11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 CAPZA2P47755 286 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 CRYZQ08257 329 aaKnown RBP11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 KLHL36Q8N4N3 616 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 CNIH4Q9P003 139 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 CAMK2AQ9UQM7 478 aa11.36□□□□□ -0.59
SYNGAP1-207ENST00000628646 TM4SF5O14894 197 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 TPOP07202 933 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 PRG2P13727 222 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 SOX18P35713 384 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 TALDO1P37837 337 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 SNRPGP62308 76 aaKnown RBP11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 SPHARQ15513 63 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 CEBPEQ15744 281 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 TSTQ16762 297 aaKnown RBP11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 SLX4IPQ5VYV7 408 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 OR8H2Q8N162 312 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 FDCSPQ8NFU4 85 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 GNRHR2Q96P88 292 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 BAIAP2Q9UQB8 552 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 IGKV3D-11A0A0A0MRZ8 115 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 LOC110117498-PIK3R3F6TDL0 507 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 HLA-DQA2P01906 255 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 CT45A8P0DMV1 189 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 CT45A9P0DMV2 189 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 NID1P14543 1247 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 EIF1AXP47813 144 aaKnown RBP11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 GIPRP48546 466 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 CT45A2Q5DJT8 189 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 LCN1P1Q5VSP4 162 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 SMARCD3Q6STE5 483 aa11.35□□□□□ -0.59
SYNGAP1-207ENST00000628646 GHDCQ8N2G8 530 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms