RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 PDE5AO76074 875 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 THRBP10828 461 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 GRNP28799 593 aaKnown RBP18.09■□□□□ 0.49
PTCD3-220ENST00000627371 RPS5P46782 204 aaKnown RBP18.09■□□□□ 0.49
PTCD3-220ENST00000627371 PIN1Q13526 163 aaPredicted RBP18.09■□□□□ 0.49
PTCD3-220ENST00000627371 PDK3Q15120 406 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 FAM69AQ5T7M9 428 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 BTLAQ7Z6A9 289 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 EPYCQ99645 322 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 PRSS27Q9BQR3 290 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 TACO1Q9BSH4 297 aaKnown RBP18.09■□□□□ 0.49
PTCD3-220ENST00000627371 THTPAQ9BU02 230 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 ZNF426Q9BUY5 554 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 CHST11Q9NPF2 352 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 ACTR3BQ9P1U1 418 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 RIMS3Q9UJD0 308 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 A4GNTQ9UNA3 340 aa18.09■□□□□ 0.49
PTCD3-220ENST00000627371 ASH1LQ9NR48 2969 aaKnown RBP18.08■□□□□ 0.49
PTCD3-220ENST00000627371 C19orf84I3L1E1 186 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 MSTNO14793 375 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 CGAP01215 116 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 CD8BP10966 210 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 TRIM25Q14258 630 aaKnown RBP18.08■□□□□ 0.48
PTCD3-220ENST00000627371 TMEM201Q5SNT2 666 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 P3H2Q8IVL5 708 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 CCDC103Q8IW40 242 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 TUSC5Q8IXB3 177 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 FAM86B1Q8N7N1 296 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 OR6S1Q8NH40 331 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 TAAR8Q969N4 342 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 BTBD10Q9BSF8 475 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 PROCRQ9UNN8 238 aa18.08■□□□□ 0.48
PTCD3-220ENST00000627371 IGKV3D-15A0A087WSY6 115 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 AQP7P3A6NL99 342 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 ZNF716A6NP11 495 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 ZNF724A8MTY0 619 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 RAMP1O60894 148 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 AKR7A3O95154 331 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 YES1P07947 543 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 PTNP21246 168 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 IFNA8P32881 189 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 SLC16A1P53985 500 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 OTUD3Q5T2D3 398 aaPredicted RBP18.07■□□□□ 0.48
PTCD3-220ENST00000627371 TTC33Q6PID6 262 aaPredicted RBP18.07■□□□□ 0.48
PTCD3-220ENST00000627371 LUZP2Q86TE4 346 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 OFCC1Q8IZS5 231 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 TMEM99Q8N816 258 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 SLC25A36Q96CQ1 311 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 ASB9Q96DX5 294 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 LRRC46Q96FV0 321 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 PYURFQ96I23 114 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 CLPTM1LQ96KA5 538 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 ZNF300Q96RE9 604 aaPredicted RBP18.07■□□□□ 0.48
PTCD3-220ENST00000627371 SLC19A3Q9BZV2 496 aa18.07■□□□□ 0.48
PTCD3-220ENST00000627371 NPDC1Q9NQX5 325 aaPredicted RBP18.07■□□□□ 0.48
PTCD3-220ENST00000627371 A8MXE2 369 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 SMNDC1O75940 238 aaKnown RBP eCLIP18.06■□□□□ 0.48
PTCD3-220ENST00000627371 ATP5HO75947 161 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 SEMG1P04279 462 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 ATP6V1B2P21281 511 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 GTF2E2P29084 291 aaKnown RBP18.06■□□□□ 0.48
PTCD3-220ENST00000627371 RBM34P42696 430 aaKnown RBP18.06■□□□□ 0.48
PTCD3-220ENST00000627371 YAP1P46937 504 aaKnown RBP18.06■□□□□ 0.48
PTCD3-220ENST00000627371 P2RY4P51582 365 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 ST3GAL3Q11203 375 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 MFSD13AQ14CX5 517 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 MTX3Q5HYI7 312 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 LCN8Q6JVE9 175 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 NKAIN4Q8IVV8 208 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 RNASE6Q93091 150 aaKnown RBP18.06■□□□□ 0.48
PTCD3-220ENST00000627371 PLSCR4Q9NRQ2 329 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 EMC3Q9P0I2 261 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 FOXD3Q9UJU5 478 aaPredicted RBP18.06■□□□□ 0.48
PTCD3-220ENST00000627371 ENPP4Q9Y6X5 453 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 V9GYQ6 96 aa18.06■□□□□ 0.48
PTCD3-220ENST00000627371 NBPF19A0A087WUL8 3843 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 PKDREJQ9NTG1 2253 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 J3KTA2 159 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 FFAR1O14842 300 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 DNAJC8O75937 253 aaPredicted RBP18.05■□□□□ 0.48
PTCD3-220ENST00000627371 PRSS23O95084 383 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 BGLAPP02818 100 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 RASSF2P50749 326 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 CBX1P83916 185 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 MS4A2Q01362 244 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 CYP2R1Q6VVX0 501 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 NUFIP2Q7Z417 695 aaKnown RBP18.05■□□□□ 0.48
PTCD3-220ENST00000627371 TSEN54Q7Z6J9 526 aaKnown RBP18.05■□□□□ 0.48
PTCD3-220ENST00000627371 CYP4Z1Q86W10 505 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 DHFR2Q86XF0 187 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 CCDC124Q96CT7 223 aaKnown RBP18.05■□□□□ 0.48
PTCD3-220ENST00000627371 C7orf34Q96L11 122 aa18.05■□□□□ 0.48
PTCD3-220ENST00000627371 SF3B5Q9BWJ5 86 aaKnown RBP18.05■□□□□ 0.48
PTCD3-220ENST00000627371 OPN3Q9H1Y3 402 aaPredicted RBP18.05■□□□□ 0.48
PTCD3-220ENST00000627371 GPR171O14626 319 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 VAMP5O95183 116 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 MT-ATP6P00846 226 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 IGFBP2P18065 325 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 COL8A1P27658 744 aa18.04■□□□□ 0.48
PTCD3-220ENST00000627371 GRPRP30550 384 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms