RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 NPIPB7O75200 414 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 DIRAS1O95057 198 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 GPIP06744 558 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 H1F0P07305 194 aaKnown RBP13.16□□□□□ -0.3
PNKP-221ENST00000627317 ENPP1P22413 925 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 GTF2E2P29084 291 aaKnown RBP13.16□□□□□ -0.3
PNKP-221ENST00000627317 RBM34P42696 430 aaKnown RBP13.16□□□□□ -0.3
PNKP-221ENST00000627317 RPS5P46782 204 aaKnown RBP13.16□□□□□ -0.3
PNKP-221ENST00000627317 ERFP50548 548 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 SLC35A1P78382 337 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 OR7A5Q15622 319 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 FGD3Q5JSP0 725 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 RIPPLY2Q5TAB7 128 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 PLXDC2Q6UX71 529 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 WDR88Q6ZMY6 472 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 CCDC71Q8IV32 467 aaPredicted RBP13.16□□□□□ -0.3
PNKP-221ENST00000627317 ADGRG5Q8IZF4 528 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 C10orf53Q8N6V4 93 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 LILRB4Q8NHJ6 448 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 MBD3L2Q8NHZ7 208 aaPredicted RBP13.16□□□□□ -0.3
PNKP-221ENST00000627317 RND1Q92730 232 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 UTP4Q969X6 686 aaKnown RBP13.16□□□□□ -0.3
PNKP-221ENST00000627317 RAB3IPQ96QF0 476 aaPredicted RBP13.16□□□□□ -0.3
PNKP-221ENST00000627317 ZNF347Q96SE7 839 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 PIP5K1AQ99755 562 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 ENKD1Q9H0I2 346 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 NPDC1Q9NQX5 325 aaPredicted RBP13.16□□□□□ -0.3
PNKP-221ENST00000627317 C6orf203Q9P0P8 240 aaPredicted RBP13.16□□□□□ -0.3
PNKP-221ENST00000627317 AURKCQ9UQB9 309 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 TRAPPC4Q9Y296 219 aa13.16□□□□□ -0.3
PNKP-221ENST00000627317 PHF3Q92576 2039 aaKnown RBP13.15□□□□□ -0.3
PNKP-221ENST00000627317 IGHV3-15A0A0B4J1V0 119 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 A0A0G2JNJ9 132 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 LIPT2A6NK58 231 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 KPNA4O00629 521 aaPredicted RBP13.15□□□□□ -0.3
PNKP-221ENST00000627317 FFAR1O14842 300 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 OR2T1O43869 369 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 EIF1BO60739 113 aaKnown RBP13.15□□□□□ -0.3
PNKP-221ENST00000627317 TOXO94900 526 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 PRSS23O95084 383 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 TGM6O95932 706 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 IL2RAP01589 272 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 MT-ND1P03886 318 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 RAP2AP10114 183 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 UMPSP11172 480 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 IMPDH2P12268 514 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 HOXB6P17509 224 aaKnown RBP13.15□□□□□ -0.3
PNKP-221ENST00000627317 SPIBQ01892 262 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 EGR4Q05215 589 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 FAM69AQ5T7M9 428 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 OR2A2Q6IF42 318 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 TSEN54Q7Z6J9 526 aaKnown RBP13.15□□□□□ -0.3
PNKP-221ENST00000627317 NKAIN4Q8IVV8 208 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 MCEMP1Q8IX19 187 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 C9orf106Q8NAJ2 232 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 PIK3C3Q8NEB9 887 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 CA5BP1Q8WTZ4 195 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 TMEM255BQ8WV15 326 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 CANT1Q8WVQ1 401 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 TMEM239Q8WW34 195 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 ASB5Q8WWX0 329 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 ROBO4Q8WZ75 1007 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 SLC25A36Q96CQ1 311 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 KTI12Q96EK9 354 aaPredicted RBP13.15□□□□□ -0.3
PNKP-221ENST00000627317 HS6ST2Q96MM7 605 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 PRSS27Q9BQR3 290 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 NAA11Q9BSU3 229 aaPredicted RBP13.15□□□□□ -0.3
PNKP-221ENST00000627317 SLC19A3Q9BZV2 496 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 KLHL4Q9C0H6 718 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 NMNAT1Q9HAN9 279 aaPredicted RBP13.15□□□□□ -0.3
PNKP-221ENST00000627317 COQ3Q9NZJ6 369 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 Q9UFV3 132 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 TESMINQ9Y4I5 508 aa13.15□□□□□ -0.3
PNKP-221ENST00000627317 CACNA1CQ13936 2221 aa13.15□□□□□ -0.31
PNKP-221ENST00000627317 ARHGAP21Q5T5U3 1957 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 TCRBV3S1A0A5B6 114 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 AQP8O94778 261 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 PLGP00747 810 aaPredicted RBP13.14□□□□□ -0.31
PNKP-221ENST00000627317 FPR1P21462 350 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 TIMP3P35625 211 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 MAGEA2P43356 314 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 SMIM11AP58511 58 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 LINC00114Q6XXX2 140 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 ZNF730Q6ZMV8 503 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 FCRLAQ7L513 359 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 PIWIL3Q7Z3Z3 882 aaKnown RBP13.14□□□□□ -0.31
PNKP-221ENST00000627317 ZNF295-AS1Q8N0V1 137 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 GCNT2Q8N0V5 402 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 SLC43A2Q8N370 569 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 MFSD8Q8NHS3 518 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 RNF128Q8TEB7 428 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 TAAR8Q969N4 342 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 ZFP3Q96NJ6 502 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 SPOCK3Q9BQ16 436 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 ZNF426Q9BUY5 554 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 PTDSS2Q9BVG9 487 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 ANKRD19PQ9H560 264 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 MAN2C1Q9NTJ4 1040 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 MED31Q9Y3C7 131 aa13.14□□□□□ -0.31
PNKP-221ENST00000627317 KIAA1549Q9HCM3 1950 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms