RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 RNF31Q96EP0 1072 aa7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 MRPL48Q96GC5 212 aaKnown RBP7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 ZDHHC12Q96GR4 267 aa7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 DMRTB1Q96MA1 342 aa7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 GPX7Q96SL4 187 aaPredicted RBP7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 YIPF2Q9BWQ6 316 aa7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 NMNAT2Q9BZQ4 307 aa7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 RAB33BQ9H082 229 aa7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 HDHD2Q9H0R4 259 aa7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 TP63Q9H3D4 680 aaPredicted RBP7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 PNO1Q9NRX1 252 aaKnown RBP7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 LANCL2Q9NS86 450 aa7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 NUFIP1Q9UHK0 495 aaKnown RBP7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 GMEB2Q9UKD1 530 aa7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 MAU2Q9Y6X3 613 aa7.61□□□□□ -1.19
SND1-IT1-201ENST00000623342 OR6C68A6NDL8 312 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 TMEM150CB9EJG8 249 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 SCDO00767 359 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 MAGEB4O15481 346 aaPredicted RBP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 PRKNO60260 465 aaPredicted RBP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 ARL6IP5O75915 188 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 CD1AP06126 327 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 MAOBP27338 520 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 PITPNBP48739 271 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 CLDN20P56880 219 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 RACK1P63244 317 aaKnown RBP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 SKP2Q13309 424 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 IL10RAQ13651 578 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 TATDN3Q17R31 274 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 DEFB133Q30KQ1 61 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 SLC25A35Q3KQZ1 300 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 GXYLT1Q4G148 440 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 CCDC58Q4VC31 144 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 TMEM53Q6P2H8 277 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 RPL22L1Q6P5R6 122 aaKnown RBP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 ATG4DQ86TL0 474 aaPredicted RBP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 GLCCI1Q86VQ1 547 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 ZNF687Q8N1G0 1237 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 PHOSPHO1Q8TCT1 267 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 ZNRF4Q8WWF5 429 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 RASD2Q96D21 266 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 CLIP3Q96DZ5 547 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 HSPA12BQ96MM6 686 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 SLC46A1Q96NT5 459 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 WACQ9BTA9 647 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 EXOSC3Q9NQT5 275 aaKnown RBP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 CUTCQ9NTM9 273 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 NCDNQ9UBB6 729 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 NLKQ9UBE8 527 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 GNG8Q9UK08 70 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 MMACHCQ9Y4U1 282 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 CLCA3PQ9Y6N3 262 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 THADAQ6YHU6 1953 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 PCDH15Q96QU1 1955 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 TRBV2A0A0J9YWF9 115 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 LMO7DNF2Z398 122 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 AGRPO00253 132 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 RGS13O14921 159 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 ZNF264O43296 627 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 OIP5O43482 229 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 SELENOFO60613 162 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 GATBO75879 557 aaKnown RBP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 GLCEO94923 617 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 UTS2O95399 124 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 RORAP35398 523 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 CCR4P51679 360 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 EPHA4P54764 986 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 HNRNPKP61978 463 aaKnown RBP eCLIP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 HSF2Q03933 536 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 TDGQ13569 410 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 ZNF74Q16587 644 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 C14orf28Q4W4Y0 310 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 NKAIN2Q5VXU1 208 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 OGFOD3Q6PK18 319 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 TTLL10Q6ZVT0 673 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 TMEM151BQ8IW70 566 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 GHDCQ8N2G8 530 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 C10orf53Q8N6V4 93 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 ZNF321PQ8N8H1 164 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 OR6K6Q8NGW6 343 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 MOSPD2Q8NHP6 518 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 ZPLD1Q8TCW7 415 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 LIPHQ8WWY8 451 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 RFT1Q96AA3 541 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 MARVELD1Q9BSK0 173 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 THAP7Q9BT49 309 aaPredicted RBP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 NXF5Q9H1B4 397 aaKnown RBP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 CHRDQ9H2X0 955 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 MRTO4Q9UKD2 239 aaKnown RBP7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 COPS3Q9UNS2 423 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 HIF3AQ9Y2N7 669 aa7.6□□□□□ -1.19
SND1-IT1-201ENST00000623342 TEX13CA0A0J9YWL9 993 aa7.59□□□□□ -1.19
SND1-IT1-201ENST00000623342 FAM172BPA6NC97 362 aa7.59□□□□□ -1.19
SND1-IT1-201ENST00000623342 FRG2CA6NGY1 282 aa7.59□□□□□ -1.19
SND1-IT1-201ENST00000623342 RHPN2P1A8MT19 583 aa7.59□□□□□ -1.19
SND1-IT1-201ENST00000623342 NOTOA8MTQ0 251 aa7.59□□□□□ -1.19
SND1-IT1-201ENST00000623342 A8MUA0 341 aa7.59□□□□□ -1.19
SND1-IT1-201ENST00000623342 BLOC1S5-TXNDC5H3BN57 136 aa7.59□□□□□ -1.19
SND1-IT1-201ENST00000623342 IMPA2O14732 288 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms