RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 TSSK2Q96PF2 358 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 DDOQ99489 341 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 OR8D2Q9GZM6 311 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 NXF5Q9H1B4 397 aaKnown RBP10.94□□□□□ -0.66
TP53-227ENST00000622645 KLHL21Q9UJP4 597 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 ALG5Q9Y673 324 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 TRBV2A0A0J9YWF9 115 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 BLACEA4D250 179 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 ELOA3DA6NLF2 546 aaPredicted RBP10.94□□□□□ -0.66
TP53-227ENST00000622645 OGG1O15527 345 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 PPM1BO75688 479 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 NPR2P20594 1047 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 PITPNBP48739 271 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 AGFG1P52594 562 aaKnown RBP10.94□□□□□ -0.66
TP53-227ENST00000622645 GBX2P52951 348 aaPredicted RBP10.94□□□□□ -0.66
TP53-227ENST00000622645 RPS11P62280 158 aaKnown RBP eCLIP10.94□□□□□ -0.66
TP53-227ENST00000622645 ZSWIM7Q19AV6 140 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 ELOA3BQ3SY89 546 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 COL13A1Q5TAT6 717 aaPredicted RBP10.94□□□□□ -0.66
TP53-227ENST00000622645 THADAQ6YHU6 1953 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 POMGNT2Q8NAT1 580 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 ELOA3Q8NG57 546 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 OR4D9Q8NGE8 314 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 OR14A16Q8NHC5 309 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 TMEM131Q92545 1883 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 TSLPQ969D9 159 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 Q96M85 177 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 ZNF578Q96N58 590 aaPredicted RBP10.94□□□□□ -0.66
TP53-227ENST00000622645 OR14A2Q96R54 314 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 SNX18Q96RF0 628 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 PLSCR3Q9NRY6 295 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 PRODH2Q9UF12 536 aa10.94□□□□□ -0.66
TP53-227ENST00000622645 TEX13CA0A0J9YWL9 993 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 A0A1B0GVT2 93 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 A0A1W2PR77 199 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 ARPC3O15145 178 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 EEF1E1O43324 174 aaKnown RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 FZD7O75084 574 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 ATF1P18846 271 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 MST1P26927 711 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 SLC37A1P57057 533 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 RPS4XP62701 263 aaKnown RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 RACK1P63244 317 aaKnown RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 GGTLC2Q14390 218 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 NDUFA5Q16718 116 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 CDONQ4KMG0 1287 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 PRR22Q8IZ63 422 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 DNAJA3Q96EY1 480 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 GFM1Q96RP9 751 aaKnown RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 UBQLN4Q9NRR5 601 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 LANCL2Q9NS86 450 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 PAQR5Q9NXK6 330 aaPredicted RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 NCDNQ9UBB6 729 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 DHCR7Q9UBM7 475 aaKnown RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 GMEB2Q9UKD1 530 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 CA14Q9ULX7 337 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 CDC14CA4D256 554 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 TLCD2A6NGC4 264 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 LILRA5A6NI73 299 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 C17orf51A8MQB3 221 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 SNRPBP14678 240 aaKnown RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 EDNRAP25101 427 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 CD27P26842 260 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 HLA-DMAP28067 261 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 NUDT1P36639 197 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 CDKN2AP42771 156 aaKnown RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 SRP9P49458 86 aaKnown RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 CLDN20P56880 219 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 ACTA2P62736 377 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 ACTG2P63267 376 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 SERTAD2Q14140 314 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 GPR176Q14439 515 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 FNDC7Q5VTL7 733 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 LEG1Q6P5S2 330 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 SYS1Q8N2H4 156 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 ZNF511Q8NB15 262 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 TRIM63Q969Q1 353 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 RFT1Q96AA3 541 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 ADOQ96SZ5 270 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 MARVELD1Q9BSK0 173 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 RTN4RQ9BZR6 473 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 NRSN2Q9GZP1 204 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 RPRD1BQ9NQG5 326 aaKnown RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 UCKL1Q9NWZ5 548 aa10.93□□□□□ -0.66
TP53-227ENST00000622645 AK6Q9Y3D8 172 aaKnown RBP10.93□□□□□ -0.66
TP53-227ENST00000622645 ALPK2Q86TB3 2170 aa10.92□□□□□ -0.66
TP53-227ENST00000622645 METTL12A8MUP2 240 aa10.92□□□□□ -0.66
TP53-227ENST00000622645 PRR32B1ATL7 298 aa10.92□□□□□ -0.66
TP53-227ENST00000622645 H0YIG0 161 aa10.92□□□□□ -0.66
TP53-227ENST00000622645 ZNF217O75362 1048 aa10.92□□□□□ -0.66
TP53-227ENST00000622645 F13BP05160 661 aa10.92□□□□□ -0.66
TP53-227ENST00000622645 UBL4AP11441 157 aa10.92□□□□□ -0.66
TP53-227ENST00000622645 RBMS1P29558 406 aaKnown RBP10.92□□□□□ -0.66
TP53-227ENST00000622645 GRK6P43250 576 aa10.92□□□□□ -0.66
TP53-227ENST00000622645 MAGEB1P43366 347 aa10.92□□□□□ -0.66
TP53-227ENST00000622645 EGR4Q05215 589 aa10.92□□□□□ -0.66
TP53-227ENST00000622645 LGALS3BPQ08380 585 aa10.92□□□□□ -0.66
TP53-227ENST00000622645 SKP2Q13309 424 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms