RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	TRAV27	A0A087WT01	109 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	NPIPA5	A0A0B4J1W7	369 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	OR6C65	A6NJZ3	312 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	LINC00587	B1AMM8	73 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	C4orf51	C9J302	202 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	NPIPA7	E9PJI5	369 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	GSTZ1	O43708	216 aa	Predicted RBP	13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	LILRB3	O75022	631 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	F12	P00748	615 aa	Predicted RBP	13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	NPIPA8	P0DM63	369 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	KCNJ3	P48549	501 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	NRG3	P56975	720 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	FOXK2	Q01167	660 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	STX4	Q12846	297 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZNF77	Q15935	545 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	UBE2NL	Q5JXB2	153 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	KISS1R	Q969F8	398 aa	Predicted RBP	13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	LCOR	Q96JN0	433 aa	Predicted RBP	13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZBP1	Q9H171	429 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	SYNPO2L	Q9H987	977 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	TRAPPC13	A5PLN9	417 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	OR2A4	O95047	310 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	SBK2	P0C263	348 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	MAK	P20794	623 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	ART1	P52961	327 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	AP3S2	P59780	193 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	CRMP1	Q14194	572 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	UBXN2B	Q14CS0	331 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	MCAT	Q8IVS2	390 aa	Known RBP	13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	NANP	Q8TBE9	248 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	GRHL3	Q8TE85	626 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	SUSD6	Q92537	303 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	OTUB2	Q96DC9	234 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	OR2A7	Q96R45	310 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	POLM	Q9NP87	494 aa	Predicted RBP	13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	NOX4	Q9NPH5	578 aa		13.25	□□□□□ -0.29
SYNRG-231	ENST00000622045	TRAV20	A0A0B4J274	112 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	EDDM13	A0A1B0GTR0	161 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	ABCD4	O14678	606 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	IL9	P15248	144 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	PVALB	P20472	110 aa	Predicted RBP	13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	ID2	Q02363	134 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	FAM209B	Q5JX69	171 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	SYNPR	Q8TBG9	265 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	PNPLA2	Q96AD5	504 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	GPR174	Q9BXC1	333 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	USP36	Q9P275	1121 aa	Known RBP	13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	DEC1	Q9P2X7	70 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	GNG8	Q9UK08	70 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	ERG	P11308	486 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	EDNRA	P25101	427 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	MEOX2	P50222	304 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	GUCA2B	Q16661	112 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	YOD1	Q5VVQ6	348 aa	Predicted RBP	13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZNF836	Q6ZNA1	936 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	FRRS1	Q6ZNA5	592 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	SNX33	Q8WV41	574 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	SLC25A38	Q96DW6	304 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	PBX4	Q9BYU1	374 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	TRBV2	A0A0J9YWF9	115 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	TBC1D3B	A6NDS4	549 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	RASGRP1	O95267	797 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZIC2	O95409	532 aa	Predicted RBP	13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	DDX6	P26196	483 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	P2RX1	P51575	399 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	C4orf46	Q504U0	113 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	DMKN	Q6E0U4	476 aa	Predicted RBP	13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	FAM111B	Q6SJ93	734 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	MUC20	Q8N307	709 aa	Predicted RBP	13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	WFIKKN2	Q8TEU8	576 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	BPIFA2	Q96DR5	249 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZNF75A	Q96N20	296 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	THSD7B	Q9C0I4	1608 aa		13.24	□□□□□ -0.29
SYNRG-231	ENST00000622045	HIDE1	A8MVS5	230 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	GABARAP	H6UMI1	98 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	ARL6IP5	O75915	188 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	ECD	O95905	644 aa	Predicted RBP	13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	ZNF3	P17036	446 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	FXYD6P3	P58550	94 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	GMFB	P60983	142 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	UBE2I	P63279	158 aa	Known RBP	13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	NRROS	Q86YC3	692 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	TMIE	Q8NEW7	156 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	OR7G2	Q8NG99	324 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	TMPRSS13	Q9BYE2	586 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	FN3K	Q9H479	309 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	SLC22A11	Q9NSA0	550 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	COA4	Q9NYJ1	87 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	MED31	Q9Y3C7	131 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045		A0A087WV48	116 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	IDS	B3KWA1	339 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	PPP1R3D	O95685	299 aa		13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	PAK4	O96013	591 aa	Predicted RBP	13.23	□□□□□ -0.29
SYNRG-231	ENST00000622045	ADH1C	P00326	375 aa		13.23	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms