RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 ASB9Q96DX5 294 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 NSMCE2Q96MF7 247 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 ZNF300Q96RE9 604 aaPredicted RBP12.75□□□□□ -0.37
CBWD3-217ENST00000621474 TMEM43Q9BTV4 400 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 CADM1Q9BY67 442 aaKnown RBP12.75□□□□□ -0.37
CBWD3-217ENST00000621474 POLR2J2Q9GZM3 115 aaKnown RBP12.75□□□□□ -0.37
CBWD3-217ENST00000621474 POLR2J3Q9H1A7 115 aaKnown RBP12.75□□□□□ -0.37
CBWD3-217ENST00000621474 BCO1Q9HAY6 547 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 MEPEQ9NQ76 525 aaPredicted RBP12.75□□□□□ -0.37
CBWD3-217ENST00000621474 NPDC1Q9NQX5 325 aaPredicted RBP12.75□□□□□ -0.37
CBWD3-217ENST00000621474 KLHL13Q9P2N7 655 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 SEC14L4Q9UDX3 406 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 RIMS3Q9UJD0 308 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 KLF2Q9Y5W3 355 aaPredicted RBP12.75□□□□□ -0.37
CBWD3-217ENST00000621474 V9GYQ6 96 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 CRYBG3Q68DQ2 2970 aa12.75□□□□□ -0.37
CBWD3-217ENST00000621474 LRRN3E7EW58 273 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 AKR7A3O95154 331 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 IFNW1P05000 195 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 GPIP06744 558 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 NTF4P34130 210 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 TAS2R41P59536 307 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 SIRPAP78324 504 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 SLC35A1P78382 337 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 LSM11P83369 360 aaKnown RBP eCLIP12.74□□□□□ -0.37
CBWD3-217ENST00000621474 DNAL1Q4LDG9 190 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 FAM69AQ5T7M9 428 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 PAQR6Q6TCH4 344 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 SLC43A2Q8N370 569 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 TMEM99Q8N816 258 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 CNEP1R1Q8N9A8 125 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 ACBD4Q8NC06 268 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 MFSD8Q8NHS3 518 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 RNF217Q8TC41 542 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 TMEM255BQ8WV15 326 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 MOGAT1Q96PD6 335 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 NDUFAF4Q9P032 175 aa12.74□□□□□ -0.37
CBWD3-217ENST00000621474 PLEKHB1Q9UF11 243 aaPredicted RBP12.74□□□□□ -0.37
CBWD3-217ENST00000621474 IGKV3D-15A0A087WSY6 115 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 AQP7P3A6NL99 342 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 GSC2O15499 205 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 AHSA1O95433 338 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 BGLAPP02818 100 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 EDNRAP25101 427 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 COL8A1P27658 744 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 SLC16A1P53985 500 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 RASGEF1BQ0VAM2 473 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 FBXL19-AS1Q494R0 122 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 C5orf46Q6UWT4 87 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 OFCC1Q8IZS5 231 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 PYURFQ96I23 114 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 MPP4Q96JB8 637 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 MUC13Q9H3R2 512 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 GP6Q9HCN6 339 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 KCNJ16Q9NPI9 418 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 GLRX2Q9NS18 164 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 SELENONQ9NZV5 590 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 KLHL9Q9P2J3 617 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 RHCGQ9UBD6 479 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 TRAV36DV7A0A075B6V5 113 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 PRSS44E7EML9 344 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 EIF1BO60739 113 aaKnown RBP12.73□□□□□ -0.37
CBWD3-217ENST00000621474 GMNNO75496 209 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 DNAJC8O75937 253 aaPredicted RBP12.73□□□□□ -0.37
CBWD3-217ENST00000621474 PLGP00747 810 aaPredicted RBP12.73□□□□□ -0.37
CBWD3-217ENST00000621474 THRBP10828 461 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 IGFBP2P18065 325 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 UGT2B15P54855 530 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 SLC17A1Q14916 467 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 PDK3Q15120 406 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 HIST2H2BCQ6DN03 193 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 ZNF474Q6S9Z5 364 aaPredicted RBP12.73□□□□□ -0.37
CBWD3-217ENST00000621474 NUFIP2Q7Z417 695 aaKnown RBP12.73□□□□□ -0.37
CBWD3-217ENST00000621474 ENPP4Q9Y6X5 453 aa12.73□□□□□ -0.37
CBWD3-217ENST00000621474 A8MXE2 369 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 EEF1E1-BLOC1S5C9J1V9 151 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 hCG_2039718K7EN88 272 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 EEF1E1O43324 174 aaKnown RBP12.72□□□□□ -0.37
CBWD3-217ENST00000621474 OR2T1O43869 369 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 DIRAS1O95057 198 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 YES1P07947 543 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 CD8BP10966 210 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 ASCL1P50553 236 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 OTUD3Q5T2D3 398 aaPredicted RBP12.72□□□□□ -0.37
CBWD3-217ENST00000621474 GTF2IRD2BQ6EKJ0 949 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 LUZP2Q86TE4 346 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 GTF2IRD2Q86UP8 949 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 DHFR2Q86XF0 187 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 OR6K3Q8NGY3 331 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 OR6S1Q8NH40 331 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 PFN4Q8NHR9 129 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 ZNF775Q96BV0 537 aaPredicted RBP12.72□□□□□ -0.37
CBWD3-217ENST00000621474 SLC25A36Q96CQ1 311 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 ZHX1-C8orf76Q96EF9 292 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 TAPBPLQ9BX59 468 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 SLC19A3Q9BZV2 496 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 OPN3Q9H1Y3 402 aaPredicted RBP12.72□□□□□ -0.37
CBWD3-217ENST00000621474 PIGMQ9H3S5 423 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 PLSCR4Q9NRQ2 329 aa12.72□□□□□ -0.37
CBWD3-217ENST00000621474 C20orf141Q9NUB4 165 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms