RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 SYPL1Q16563 259 aa9.09□□□□□ -0.95
CLTCL1-211ENST00000621271 RSPO2Q6UXX9 243 aaPredicted RBP9.09□□□□□ -0.95
CLTCL1-211ENST00000621271 OR56B2PQ8NGI1 322 aa9.09□□□□□ -0.95
CLTCL1-211ENST00000621271 WFDC5Q8TCV5 224 aa9.09□□□□□ -0.95
CLTCL1-211ENST00000621271 ZFP90Q8TF47 636 aa9.09□□□□□ -0.95
CLTCL1-211ENST00000621271 FOXRED1Q96CU9 486 aaPredicted RBP9.09□□□□□ -0.95
CLTCL1-211ENST00000621271 MAELQ96JY0 434 aaKnown RBP9.09□□□□□ -0.95
CLTCL1-211ENST00000621271 CCDC74BQ96LY2 380 aa9.09□□□□□ -0.95
CLTCL1-211ENST00000621271 HYLS1Q96M11 299 aa9.09□□□□□ -0.95
CLTCL1-211ENST00000621271 TRIB1Q96RU8 372 aa9.09□□□□□ -0.95
CLTCL1-211ENST00000621271 C1orf198Q9H425 327 aa9.09□□□□□ -0.95
CLTCL1-211ENST00000621271 H7C2Y5 167 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 NRG2O14511 850 aaPredicted RBP9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 TSFMP43897 325 aaKnown RBP9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 AFMIDQ63HM1 303 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 OR7E24Q6IFN5 339 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 SLC22A25Q6T423 547 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 GSG1LQ6UXU4 331 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 PXKQ7Z7A4 578 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 WFDC8Q8IUA0 241 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 DTWD1Q8N5C7 304 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 DTX3Q8N9I9 347 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 STEAP2Q8NFT2 490 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 TIAM2Q8IVF5 1701 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 F5H0A9 414 aaPredicted RBP9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 SERPINA2P20848 420 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 NR4A2P43354 598 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 BIDP55957 195 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 RHEBQ15382 184 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 EXOSC6Q5RKV6 272 aaKnown RBP9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 METRNLQ641Q3 311 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 DESI1Q6ICB0 168 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 DHRS13Q6UX07 377 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 SGPP2Q8IWX5 399 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 CNOT9Q92600 299 aaKnown RBP9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 C7orf34Q96L11 122 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 METTL9Q9H1A3 318 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 GPR83Q9NYM4 423 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 TRAPPC2LQ9UL33 140 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 TOGARAM1Q9Y4F4 1720 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 MITFO75030 526 aaPredicted RBP9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 SLC34A2O95436 690 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 GPX3P22352 226 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 CXCR4P61073 352 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 KEAP1Q14145 624 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 RTL6Q6ICC9 239 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 Q7L0L9 218 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 TMEM150AQ86TG1 271 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 STT3BQ8TCJ2 826 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF681Q96N22 645 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 NICN1Q9BSH3 213 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 MS4A8Q9BY19 250 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 PCED1AQ9H1Q7 454 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 P2RY12Q9H244 342 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 APMAPQ9HDC9 416 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 PCDHGA1Q9Y5H4 931 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 TJP1Q07157 1748 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 EDN3P14138 238 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 TUBG1P23258 451 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 DNASE1P24855 282 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 FKBP2P26885 142 aaKnown RBP9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 SSTR4P31391 388 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 SF3A2Q15428 464 aaKnown RBP9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 C18orf63Q68DL7 685 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 SLCO4C1Q6ZQN7 724 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 KMT5CQ86Y97 462 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 PGBD5Q8N414 524 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 OR5W2Q8NH69 310 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 C20orf27Q9GZN8 174 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 PPT2Q9UMR5 302 aa9.08□□□□□ -0.96
CLTCL1-211ENST00000621271 C7orf72A4D263 438 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 TMEM221A6NGB7 291 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 M0R296 226 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 ARHGAP33O14559 1287 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 DVL2O14641 736 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 RP2O75695 350 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 OR7C1O76099 320 aaPredicted RBP9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 STK17BO94768 372 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 NXPH2O95156 264 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 MT-CO3P00414 261 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 ARSBP15848 533 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 PTGER4P35408 488 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 EDDM3BP56851 147 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 TMEM71Q6P5X7 295 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 Q6ZS52 159 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 YRDCQ86U90 279 aaKnown RBP9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 KIF18BQ86Y91 864 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 GDPD1Q8N9F7 314 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 SCCPDHQ8NBX0 429 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 ST7LQ8TDW4 575 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 ASB12Q8WXK4 309 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 RLIMQ9NVW2 624 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 SCN7AQ01118 1682 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 ZNF891A8MT65 544 aaPredicted RBP9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 CRYAAP02489 173 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 CAPZBP47756 277 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 CX3CR1P49238 355 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 CAV2P51636 162 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 CSNK1G2P78368 415 aa9.07□□□□□ -0.96
CLTCL1-211ENST00000621271 IKZF1Q13422 519 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms