RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 PAPD4Q6PIY7 484 aaKnown RBP9.58□□□□□ -0.88
VPS11-207ENST00000620429 TECPR1Q7Z6L1 1165 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 COMTD1Q86VU5 262 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 NPAS3Q8IXF0 933 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 EID2Q8N6I1 236 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 UBAC2Q8NBM4 344 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 SDR9C7Q8NEX9 313 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 BBS10Q8TAM1 723 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 SLC25A36Q96CQ1 311 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 MED8Q96G25 268 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 ALG8Q9BVK2 526 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 JAM3Q9BX67 310 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 AUNIPQ9H7T9 357 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 ASCL3Q9NQ33 180 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 RHCGQ9UBD6 479 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 LHX3Q9UBR4 397 aa9.58□□□□□ -0.88
VPS11-207ENST00000620429 RUVBL1Q9Y265 456 aaKnown RBP9.58□□□□□ -0.88
VPS11-207ENST00000620429 TRAV14DV4A0A0A6YYC5 116 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 C1orf226A1L170 272 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 DVL2O14641 736 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 SCAMP2O15127 329 aaKnown RBP9.57□□□□□ -0.88
VPS11-207ENST00000620429 REM1O75628 298 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 NDUFB6O95139 128 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 TMEM11P17152 192 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 CORO1AP31146 461 aaKnown RBP9.57□□□□□ -0.88
VPS11-207ENST00000620429 MAPK9P45984 424 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 IRF8Q02556 426 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 CLINT1Q14677 625 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 NDUFA9Q16795 377 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 NKPD1Q17RQ9 610 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 NSUN5P2Q63ZY6 315 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 KIAA1211LQ6NV74 962 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 TSSK4Q6SA08 328 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 SLC36A1Q7Z2H8 476 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 MAFAQ8NHW3 353 aaPredicted RBP9.57□□□□□ -0.88
VPS11-207ENST00000620429 NFKBIDQ8NI38 313 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 STOML3Q8TAV4 291 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 LCN9Q8WX39 176 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 TCTN2Q96GX1 697 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 ZNF75AQ96N20 296 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 LAT2Q9GZY6 243 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 GOLT1BQ9Y3E0 138 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 CEP290O15078 2479 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 NPIPB8E9PQR5 432 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 PGRMC2O15173 223 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 PIP5K1CO60331 668 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 STC2O76061 302 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 AK1P00568 194 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 RAC2P15153 192 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 MYOGP15173 224 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 GABRR2P28476 465 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 EPHB3P54753 998 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 SLC26A5P58743 744 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 BDH1Q02338 343 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 OC90Q02509 493 aaPredicted RBP9.57□□□□□ -0.88
VPS11-207ENST00000620429 GLO1Q04760 184 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 PJVKQ0ZLH3 352 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 SCARB2Q14108 478 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 RSU1Q15404 277 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 LINC00303Q3SY05 128 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 ARHGAP40Q5TG30 622 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 DCAF12L2Q5VW00 463 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 LYPLAL1Q5VWZ2 237 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 SLC8B1Q6J4K2 584 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 APOOLQ6UXV4 268 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 ZNF227Q86WZ6 799 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 NXPE1Q8N323 547 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 HJURPQ8NCD3 748 aaPredicted RBP9.57□□□□□ -0.88
VPS11-207ENST00000620429 DNAAF1Q8NEP3 725 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 ST7LQ8TDW4 575 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 SLC22A12Q96S37 553 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 CDX2Q99626 313 aaPredicted RBP9.57□□□□□ -0.88
VPS11-207ENST00000620429 NDUFAF3Q9BU61 184 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 CCDC86Q9H6F5 360 aaKnown RBP9.57□□□□□ -0.88
VPS11-207ENST00000620429 TMEM185BQ9H7F4 350 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 PTGFRNQ9P2B2 879 aa9.57□□□□□ -0.88
VPS11-207ENST00000620429 GDF2Q9UK05 429 aaPredicted RBP9.57□□□□□ -0.88
VPS11-207ENST00000620429 TRBV5-4A0A0C4DH59 114 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.56□□□□□ -0.88
VPS11-207ENST00000620429 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.56□□□□□ -0.88
VPS11-207ENST00000620429 E7EQ34 232 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 FAM227AF5H4B4 570 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 GOSR2O14653 212 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 ZNF749O43361 778 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 ITGA5P08648 1049 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 CLTBP09497 229 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 GNALP38405 381 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 MAGEB1P43366 347 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 MTNR1AP48039 350 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 SLC6A12P48065 614 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 CSRP2Q16527 193 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 NDUFAF6Q330K2 333 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 SMARCD3Q6STE5 483 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 GAREM2Q75VX8 874 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 Q7L0L9 218 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 ZNF614Q8N883 585 aa9.56□□□□□ -0.88
VPS11-207ENST00000620429 BSCL2Q96G97 398 aaPredicted RBP9.56□□□□□ -0.88
VPS11-207ENST00000620429 CCNL2Q96S94 520 aaPredicted RBP9.56□□□□□ -0.88
VPS11-207ENST00000620429 ZNF471Q9BX82 626 aaPredicted RBP9.56□□□□□ -0.88
VPS11-207ENST00000620429 ADAM19Q9H013 955 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms