RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 AADACL4Q5VUY2 407 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 APCDD1LQ8NCL9 501 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 TMEM239Q8WW34 195 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 ANKRD10Q9NXR5 420 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 CFL2Q9Y281 166 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 TMEM5Q9Y2B1 443 aa19.6■□□□□ 0.73
SGMS1-210ENST00000619438 EXOSC1Q9Y3B2 195 aaKnown RBP19.6■□□□□ 0.73
SGMS1-210ENST00000619438 PIP5K1CO60331 668 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 CD40LGP29965 261 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 PLAURQ03405 335 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 ITGADQ13349 1161 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 FLYWCH1Q4VC44 716 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 RPL13AP3Q6NVV1 102 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 OR2T33Q8NG76 320 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 OR14A16Q8NHC5 309 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 PTPMT1Q8WUK0 201 aaPredicted RBP19.59■□□□□ 0.73
SGMS1-210ENST00000619438 RNFT2Q96EX2 444 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 HS6ST2Q96MM7 605 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 PELOQ9BRX2 385 aaKnown RBP19.59■□□□□ 0.73
SGMS1-210ENST00000619438 OR8D2Q9GZM6 311 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 ASF1BQ9NVP2 202 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 UNC119BA6NIH7 251 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 PRAMEF2O60811 474 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 GPX5O75715 221 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 MYL12AP19105 171 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 CTBP2P56545 445 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 TMPRSS11FQ6ZWK6 438 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 OR9Q1Q8NGQ5 310 aa19.59■□□□□ 0.73
SGMS1-210ENST00000619438 CHCHD3Q9NX63 227 aaKnown RBP19.59■□□□□ 0.73
SGMS1-210ENST00000619438 CDC42EP2O14613 210 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 PFDN1O60925 122 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 ZFAND5O76080 213 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 GKN3PP0CG01 181 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 CPEP16870 476 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 PSMA1P25786 263 aaKnown RBP19.58■□□□□ 0.72
SGMS1-210ENST00000619438 CD96P40200 585 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 ETV1P50549 477 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 PPP5CP53041 499 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF141Q15928 474 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 SLC30A6Q6NXT4 461 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 WDR88Q6ZMY6 472 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 BTLAQ7Z6A9 289 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 CENPSQ8N2Z9 138 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 MINDY2Q8NBR6 621 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 JAM3Q9BX67 310 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 TMEM27Q9HBJ8 222 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 STUB1Q9UNE7 303 aa19.58■□□□□ 0.72
SGMS1-210ENST00000619438 PPIEQ9UNP9 301 aaKnown RBP19.58■□□□□ 0.72
SGMS1-210ENST00000619438 NPIPA5A0A0B4J1W7 369 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 NPIPA7E9PJI5 369 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 NPIPB9F8W1W9 429 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 KPNA4O00629 521 aaPredicted RBP19.57■□□□□ 0.72
SGMS1-210ENST00000619438 NPIPA8P0DM63 369 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 SOX6P35712 828 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 CRYBB2P43320 205 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 GPR143P51810 404 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 PSMD4P55036 377 aaKnown RBP19.57■□□□□ 0.72
SGMS1-210ENST00000619438 WNT4P56705 351 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 FUT7Q11130 342 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 CLEC12AQ5QGZ9 265 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 NXNL2Q5VZ03 156 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 HSDL2Q6YN16 418 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 ZAR1Q86SH2 424 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 MROQ9BYG7 248 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 FN3KQ9H479 309 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 COPS7AQ9UBW8 275 aa19.57■□□□□ 0.72
SGMS1-210ENST00000619438 EXOGQ9Y2C4 368 aaKnown RBP19.57■□□□□ 0.72
SGMS1-210ENST00000619438 hCG_2014768A0A024R1R8 64 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 HTR1FP30939 366 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 RBM34P42696 430 aaKnown RBP19.56■□□□□ 0.72
SGMS1-210ENST00000619438 MLF1P58340 268 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 SPINK14Q6IE38 97 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 RPUSD3Q6P087 351 aaKnown RBP19.56■□□□□ 0.72
SGMS1-210ENST00000619438 PHC2Q8IXK0 858 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 CMIPQ8IY22 773 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 LSMEM1Q8N8F7 131 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 SLC2A12Q8TD20 617 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 OIT3Q8WWZ8 545 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 G6PC3Q9BUM1 346 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF426Q9BUY5 554 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 TRIM2Q9C040 744 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 UBQLN3Q9H347 655 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 RNF167Q9H6Y7 350 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.56■□□□□ 0.72
SGMS1-210ENST00000619438 LRFN1Q9P244 771 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 GPR52Q9Y2T5 361 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 PEX16Q9Y5Y5 336 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 SETXQ7Z333 2677 aaKnown RBP19.56■□□□□ 0.72
SGMS1-210ENST00000619438 A0A075B6Q4 140 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 A0A0B4J2E0 115 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 A0A1B0GX12 115 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 CHP2O43745 196 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 RCBTB2O95199 551 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 SOX3P41225 446 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 CYB561P49447 251 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 CDH11P55287 796 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 TPBGQ13641 420 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 OR1C1Q15619 314 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 ZNF766Q5HY98 468 aa19.56■□□□□ 0.72
SGMS1-210ENST00000619438 PDZK1Q5T2W1 519 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms