RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ZNF225Q9UK10 706 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 GUCA1BQ9UMX6 200 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 TMED5Q9Y3A6 229 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 INSIG2Q9Y5U4 225 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 IGHV3-15A0A0B4J1V0 119 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 CLDN25C9JDP6 229 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 ZNF432O94892 652 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 MPZL1O95297 269 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 C2P06681 752 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 ADRA2AP08913 450 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 ANXA4P09525 319 aaPredicted RBP3.9□□□□□ -1.78
SNCA-213ENST00000618500 ZNF250P15622 560 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 ATP6V1C1P21283 382 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 POLR2HP52434 150 aaKnown RBP3.9□□□□□ -1.78
SNCA-213ENST00000618500 WDR4P57081 412 aaKnown RBP3.9□□□□□ -1.78
SNCA-213ENST00000618500 UBE2NP61088 152 aaKnown RBP3.9□□□□□ -1.78
SNCA-213ENST00000618500 PAX8Q06710 450 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 CARTPTQ16568 116 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 NRN1LQ496H8 165 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 ARMCX4Q5H9R4 360 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 DCST2Q5T1A1 773 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 EMBQ6PCB8 327 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 SPATA21Q7Z572 469 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 ZAR1Q86SH2 424 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 RELL1Q8IUW5 271 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 VANGL1Q8TAA9 524 aaPredicted RBP3.9□□□□□ -1.78
SNCA-213ENST00000618500 GTF3AQ92664 365 aaKnown RBP3.9□□□□□ -1.78
SNCA-213ENST00000618500 EXT2Q93063 718 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 DACT3Q96B18 629 aaPredicted RBP3.9□□□□□ -1.78
SNCA-213ENST00000618500 ZNF350Q9GZX5 532 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 TMEM185BQ9H7F4 350 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 ZFAND3Q9H8U3 227 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 MIEF1Q9NQG6 463 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 FARSBQ9NSD9 589 aaKnown RBP3.9□□□□□ -1.78
SNCA-213ENST00000618500 C1RLQ9NZP8 487 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 PDP1Q9P0J1 537 aaPredicted RBP3.9□□□□□ -1.78
SNCA-213ENST00000618500 CORINQ9Y5Q5 1042 aa3.9□□□□□ -1.78
SNCA-213ENST00000618500 A0A1W2PNR3 127 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 FAM187AA6NFU0 413 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 TRIM49D1C9J1S8 452 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 ERLIN1O75477 346 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 FAM157BP0CG42 384 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 SELEP16581 610 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 MDKP21741 143 aaPredicted RBP3.9□□□□□ -1.79
SNCA-213ENST00000618500 PROK1P58294 105 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 PAX2Q02962 417 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 C2orf80Q0P641 193 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 ARHGAP11BQ3KRB8 267 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 KLF17Q5JT82 389 aaPredicted RBP3.9□□□□□ -1.79
SNCA-213ENST00000618500 GPRIN3Q6ZVF9 776 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 R3HCC1LQ7Z5L2 792 aaKnown RBP3.9□□□□□ -1.79
SNCA-213ENST00000618500 SNX32Q86XE0 403 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 ZNF440Q8IYI8 595 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 CPEB3Q8NE35 698 aaKnown RBP3.9□□□□□ -1.79
SNCA-213ENST00000618500 PHOSPHO1Q8TCT1 267 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 PYROXD1Q8WU10 500 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 APIPQ96GX9 242 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 TIMD4Q96H15 378 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 FAM71F1Q96KD3 344 aaPredicted RBP3.9□□□□□ -1.79
SNCA-213ENST00000618500 RHOXF2Q9BQY4 288 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 MRPL37Q9BZE1 423 aaKnown RBP3.9□□□□□ -1.79
SNCA-213ENST00000618500 MRPL46Q9H2W6 279 aaKnown RBP3.9□□□□□ -1.79
SNCA-213ENST00000618500 REEP4Q9H6H4 257 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 C12orf10Q9HB07 376 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 NPHS2Q9NP85 383 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 CYSLTR2Q9NS75 346 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 NECAP2Q9NVZ3 263 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 SLCO1C1Q9NYB5 712 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 LEF1Q9UJU2 399 aaPredicted RBP3.9□□□□□ -1.79
SNCA-213ENST00000618500 LRCH1Q9Y2L9 728 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 CCL27Q9Y4X3 112 aa3.9□□□□□ -1.79
SNCA-213ENST00000618500 GNG14A0A1W2PPG7 69 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 HMX2A2RU54 273 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 FRS3O43559 492 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 SNAP29O95721 258 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 JUNP05412 331 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 NEFHP12036 1026 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 RPS4Y1P22090 263 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 COL8A2P25067 703 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 HSD17B3P37058 310 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 LIPAP38571 399 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 SERPINB9P50453 376 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 FOXG1P55316 489 aaPredicted RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 SESN3P58005 492 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 DR1Q01658 176 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 CHRNEQ04844 493 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 CLCQ05315 142 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 ZNF154Q13106 437 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 FASTKD3Q14CZ7 662 aaKnown RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 TOMM34Q15785 309 aaPredicted RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 TAF9Q16594 264 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 ZNF678Q5SXM1 525 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 CBLN3Q6UW01 205 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 C5orf46Q6UWT4 87 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 C6orf89Q6UWU4 347 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 LRRN1Q6UXK5 716 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 Q6YL49 198 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 MYLK4Q86YV6 388 aaPredicted RBP3.89□□□□□ -1.79
SNCA-213ENST00000618500 SLC22A9Q8IVM8 553 aa3.89□□□□□ -1.79
SNCA-213ENST00000618500 TMEM151AQ8N4L1 468 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms