RNA–Protein interactions for RNA: ENST00000617926.4

CLTCL1-210, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-210ENST00000617926 MS4A3Q96HJ5 214 aa11.87□□□□□ -0.51
CLTCL1-210ENST00000617926 ZFP3Q96NJ6 502 aa11.87□□□□□ -0.51
CLTCL1-210ENST00000617926 GSDMCQ9BYG8 508 aa11.87□□□□□ -0.51
CLTCL1-210ENST00000617926 TRIM2Q9C040 744 aa11.87□□□□□ -0.51
CLTCL1-210ENST00000617926 SRMSQ9H3Y6 488 aa11.87□□□□□ -0.51
CLTCL1-210ENST00000617926 NUP50Q9UKX7 468 aa11.87□□□□□ -0.51
CLTCL1-210ENST00000617926 ENTPD2Q9Y5L3 495 aa11.87□□□□□ -0.51
CLTCL1-210ENST00000617926 EML5Q05BV3 1969 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 LOC105371267A0A1B0GV96 52 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 NAP1L6A6NFF2 107 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 TUBAL3A6NHL2 446 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 LRRC72A6NJI9 287 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 ZNF879B4DU55 563 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 B8ZZF3 427 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 CYR61O00622 381 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 IFNA7P01567 189 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 GYPBP06028 91 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 DHODHQ02127 395 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 ID2Q02363 134 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 SNTB2Q13425 540 aaKnown RBP11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 FAM199XQ6PEV8 388 aaPredicted RBP11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 HDDC2Q7Z4H3 204 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 ZAR1Q86SH2 424 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 CMTM4Q8IZR5 234 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 TMEM52Q8NDY8 209 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 GRHL3Q8TE85 626 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 ZMYND19Q96E35 227 aaPredicted RBP11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 MRPL48Q96GC5 212 aaKnown RBP11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 MAP6Q96JE9 813 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 AUNIPQ9H7T9 357 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 ANKRD10Q9NXR5 420 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 DNAJB12Q9NXW2 375 aaKnown RBP11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 AKAP7Q9P0M2 348 aaPredicted RBP11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 USP36Q9P275 1121 aaKnown RBP11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 KCNN3Q9UGI6 736 aa11.86□□□□□ -0.51
CLTCL1-210ENST00000617926 LRP4O75096 1905 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 A0A1B0GUH1 482 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 ZSCAN5BA6NJL1 495 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 GABARAPH6UMI1 98 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 K7EQS6 105 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 NDUFB2O95178 105 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 MPC2O95563 127 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 ECDO95905 644 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 APODP05090 189 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 SYPP08247 313 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 CT62P0C5K7 136 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 HIST1H1CP16403 213 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 GABRA3P34903 492 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 DIO1P49895 249 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 CCR9P51686 369 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 SNTA1Q13424 505 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 EXOSC2Q13868 293 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 EXOSC7Q15024 291 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 ZSWIM7Q19AV6 140 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 ISXQ2M1V0 245 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 RNASE12Q5GAN4 147 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 SLC35D3Q5M8T2 416 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 OLFML2AQ68BL7 652 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 FIGLAQ6QHK4 219 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 ESPNLQ6ZVH7 1005 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 C1orf210Q8IVY1 113 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 OR11G2Q8NGC1 345 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 OR52E2Q8NGJ4 325 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 ASB12Q8WXK4 309 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 SLC25A38Q96DW6 304 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 ERMAPQ96PL5 475 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 OR14A2Q96R54 314 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 DDOQ99489 341 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 GFI1Q99684 422 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 ORAI3Q9BRQ5 295 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 UTP23Q9BRU9 249 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 LMF2Q9BU23 707 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 ZNF436Q9C0F3 470 aaPredicted RBP11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 NCDNQ9UBB6 729 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 RPS6KB2Q9UBS0 482 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 FBXL3Q9UKT7 428 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 CLEC4AQ9UMR7 237 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 MRPS2Q9Y399 296 aaKnown RBP11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 SPACA6W5XKT8 324 aa11.85□□□□□ -0.51
CLTCL1-210ENST00000617926 A6NCN8 305 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 OR5K3A6NET4 321 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 AIPO00170 330 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 PDCD5O14737 125 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 PIN1P1O15428 100 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 SULT1B1O43704 296 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 ADAM11O75078 769 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 LDB3O75112 727 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 CBX7O95931 251 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 DRD1P21728 446 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 EDNRAP25101 427 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 DPP4P27487 766 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 MNDAP41218 407 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 EMDP50402 254 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 ADPRHP54922 357 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 SEC13P55735 322 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 RPL6Q02878 288 aaKnown RBP11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 LGALS3BPQ08380 585 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 ILF3Q12906 894 aaKnown RBP eCLIP11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 PRRT3Q5FWE3 981 aa11.84□□□□□ -0.51
CLTCL1-210ENST00000617926 TSSK4Q6SA08 328 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms