RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 LDLRP01130 860 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 IFI30P13284 250 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 LIMS1P48059 325 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 AGFG1P52594 562 aaKnown RBP13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 IST1P53990 364 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 PRKCDQ05655 676 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZNF74Q16587 644 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 NSUN5P2Q63ZY6 315 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 P4HA3Q7Z4N8 544 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 AMIGO2Q86SJ2 522 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 ADGRE4PQ86SQ3 457 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 RPRMLQ8N4K4 120 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 OR4K5Q8NGD3 323 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 OR6S1Q8NH40 331 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 FNDC9Q8TBE3 224 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 LRTOMTQ8WZ04 291 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZHX1-C8orf76Q96EF9 292 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 MOGAT1Q96PD6 335 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 UCN2Q96RP3 112 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 CLCF1Q9UBD9 225 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZNF175Q9Y473 711 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 POLEQ07864 2286 aa13.98□□□□□ -0.17
PCDHGC3-204ENST00000617222 PRRC2CQ9Y520 2896 aaKnown RBP13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 CD8B2A6NJW9 211 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 SLC22A20A6NK97 555 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 DNPH1O43598 174 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 OR10H3O60404 316 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 E2F6O75461 281 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 AQP8O94778 261 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 AKR7A3O95154 331 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 FCGR1AP12314 374 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 FUT1P19526 365 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 GTF2E2P29084 291 aaKnown RBP13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 GRPRP30550 384 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 MFSD13AQ14CX5 517 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 LAPTM4AQ15012 233 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 ATP6AP1Q15904 470 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZNF239Q16600 458 aaKnown RBP13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 B3GNT6Q6ZMB0 384 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 TMEM179BQ7Z7N9 219 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 CDK20Q8IZL9 346 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 LRRC17Q8N6Y2 441 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 TMEM99Q8N816 258 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 PIGXQ8TBF5 258 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 STMN2Q93045 179 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 WNT2BQ93097 391 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 BPIFA2Q96DR5 249 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 NAA11Q9BSU3 229 aaPredicted RBP13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 NTN4Q9HB63 628 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 C6orf203Q9P0P8 240 aaPredicted RBP13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 KALRNO60229 2985 aa13.97□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZNF814B7Z6K7 855 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 M0R082 166 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 CCL21O00585 134 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 SMAD9O15198 467 aaKnown RBP13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 EIF1BO60739 113 aaKnown RBP13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 OR7A10O76100 309 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 CCNB2O95067 398 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 MT-ATP6P00846 226 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 IGF2P01344 180 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 GLI4P10075 376 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 MAKP20794 623 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 DNAJA1P31689 397 aaKnown RBP13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 GPR4P46093 362 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 OMPP47874 163 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 CTBP2P56545 445 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 NUP107P57740 925 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 ELF3P78545 371 aaPredicted RBP13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 H3F3AP84243 136 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 PMPCAQ10713 525 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 OTUD3Q5T2D3 398 aaPredicted RBP13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 HMBOX1Q6NT76 420 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 PAQR6Q6TCH4 344 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 SEM1Q6ZVN7 128 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 NCCRP1Q6ZVX7 275 aaPredicted RBP13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 FCRLAQ7L513 359 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 MAMDC2Q7Z304 686 aaPredicted RBP13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 SLC46A3Q7Z3Q1 461 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 CCDC103Q8IW40 242 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 C9orf106Q8NAJ2 232 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZNF417Q8TAU3 575 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 FAM46AQ96IP4 442 aaKnown RBP13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 ZNF587Q96SQ5 575 aaPredicted RBP13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 PKP2Q99959 881 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 TTYH2Q9BSA4 534 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 BDH2Q9BUT1 245 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 ASPNQ9BXN1 380 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 NANSQ9NR45 359 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 SEC14L4Q9UDX3 406 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 MEMO1Q9Y316 297 aa13.96□□□□□ -0.17
PCDHGC3-204ENST00000617222 CFAP46Q8IYW2 2715 aa13.96□□□□□ -0.18
PCDHGC3-204ENST00000617222 HTR3EA5X5Y0 456 aa13.95□□□□□ -0.18
PCDHGC3-204ENST00000617222 EFCAB9A8MZ26 197 aa13.95□□□□□ -0.18
PCDHGC3-204ENST00000617222 E9PLN8 166 aa13.95□□□□□ -0.18
PCDHGC3-204ENST00000617222 LRRTM2O43300 516 aa13.95□□□□□ -0.18
PCDHGC3-204ENST00000617222 RAMP1O60894 148 aa13.95□□□□□ -0.18
PCDHGC3-204ENST00000617222 HIST1H2ABP04908 130 aa13.95□□□□□ -0.18
PCDHGC3-204ENST00000617222 IFNGR2P38484 337 aa13.95□□□□□ -0.18
PCDHGC3-204ENST00000617222 PMS2P3Q13401 168 aa13.95□□□□□ -0.18
PCDHGC3-204ENST00000617222 GK3PQ14409 553 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms