RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 EPHA3P29320 983 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 APOBEC3AP31941 199 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 MVDP53602 400 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 PRPS1P60891 318 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 VLDLRP98155 873 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 LRRC74AQ0VAA2 488 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 BNIP2Q12982 314 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 GSTA3Q16772 222 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 HIKESHIQ53FT3 197 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 AAED1Q7RTV5 226 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 GPAT4Q86UL3 456 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 PHC2Q8IXK0 858 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 ZNF440Q8IYI8 595 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 OR52P1PQ8NH57 321 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 C10orf105Q8TEF2 133 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 NANOS1Q8WY41 292 aaKnown RBP18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 SF3B5Q9BWJ5 86 aaKnown RBP18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 DSPPQ9NZW4 1301 aa18.16■□□□□ 0.5
TRAPPC3-208ENST00000616074 RFXANKO14593 260 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 LY6HO94772 140 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 KRT75O95678 551 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 WNT11O96014 354 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 ACAA2P42765 397 aaKnown RBP18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 EFNA4P52798 201 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 CHRNB3Q05901 458 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 LIN52Q52LA3 116 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 CEP85LQ5SZL2 805 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 KLHL24Q6TFL4 600 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 CADM2Q8N3J6 435 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 POMGNT2Q8NAT1 580 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 AURKBQ96GD4 344 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 ZBTB18Q99592 522 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 P2RX2Q9UBL9 471 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 MOKQ9UQ07 419 aa18.15■□□□□ 0.5
TRAPPC3-208ENST00000616074 KLF11O14901 512 aa18.14■□□□□ 0.49
TRAPPC3-208ENST00000616074 BMP4P12644 408 aa18.14■□□□□ 0.49
TRAPPC3-208ENST00000616074 ETFAP13804 333 aa18.14■□□□□ 0.49
TRAPPC3-208ENST00000616074 P2RY4P51582 365 aa18.14■□□□□ 0.49
TRAPPC3-208ENST00000616074 C1QTNF12Q5T7M4 302 aa18.14■□□□□ 0.49
TRAPPC3-208ENST00000616074 ANKRD42Q8N9B4 389 aa18.14■□□□□ 0.49
TRAPPC3-208ENST00000616074 GLB1L3Q8NCI6 653 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-208ENST00000616074 ADPRHL2Q9NX46 363 aa18.14■□□□□ 0.49
TRAPPC3-208ENST00000616074 CDC42EP3Q9UKI2 254 aa18.14■□□□□ 0.49
TRAPPC3-208ENST00000616074 ZNF443Q9Y2A4 671 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC3-208ENST00000616074 PMF1-BGLAPU3KQ54 211 aa18.14■□□□□ 0.49
TRAPPC3-208ENST00000616074 HDAC3O15379 428 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 FRS3O43559 492 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 BCHEP06276 602 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 CSF3P09919 207 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 FAM157CP0CG43 387 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 PRG2P13727 222 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 ZNF16P17020 682 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 LGALS3BPQ08380 585 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 SWI5Q1ZZU3 235 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 MST1LQ2TV78 715 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 RPS26P11Q5JNZ5 115 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 TMEM225Q6GV28 225 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 WBP2NLQ6ICG8 309 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 PROX1Q92786 737 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 FBXO17Q96EF6 278 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 BOD1Q96IK1 185 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 KCNK17Q96T54 332 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 TAPBPLQ9BX59 468 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 PARD6BQ9BYG5 372 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 PIF1Q9H611 641 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 CHST2Q9Y4C5 530 aa18.13■□□□□ 0.49
TRAPPC3-208ENST00000616074 IGHV1-18A0A0C4DH31 117 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 TRPC5OSA6NMA1 111 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 A8MVM7 634 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 LGI1O95970 557 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 F12P00748 615 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 IL6P05231 212 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 TFPTP0C1Z6 253 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 IGHV4-31P0DP07 118 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 KITP10721 976 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 CRATP43155 626 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 SELENOPP49908 381 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 CRISP3P54108 245 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 WDR4P57081 412 aaKnown RBP18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 COPZ1P61923 177 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 TBRG1Q3YBR2 411 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 GTDC1Q4AE62 458 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 PDCD4Q53EL6 469 aaKnown RBP18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 RNF220Q5VTB9 566 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 HHATQ5VTY9 493 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 ABHD12BQ7Z5M8 362 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 CLIP4Q8N3C7 705 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 OR1K1Q8NGR3 316 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 SLC38A5Q8WUX1 472 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 ALKBH3Q96Q83 286 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 OBP2BQ9NPH6 170 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 TMEM45AQ9NWC5 275 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 TMEM160Q9NX00 188 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 CALML5Q9NZT1 146 aa18.12■□□□□ 0.49
TRAPPC3-208ENST00000616074 MALRD1Q5VYJ5 2156 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 SNNO75324 88 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 SLC22A3O75751 556 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 KRT33AO76009 404 aa18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 USF1P22415 310 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC3-208ENST00000616074 DSTNP60981 165 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms