RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 ZNF208O43345 1280 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 TRAPPC6AO75865 159 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 FPR3P25089 353 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 ELK4P28324 431 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 ADH6P28332 368 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SFTPDP35247 375 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 EIF1P41567 113 aaKnown RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 HTR3AP46098 478 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 RPS5P46782 204 aaKnown RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 STARP49675 285 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 TDGF1P3P51864 188 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 TPD52P55327 224 aaPredicted RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 GFRA1P56159 465 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 CLDN15P56746 228 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 ADARB1P78563 741 aaKnown RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 IL1RL1Q01638 556 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 ALDH6A1Q02252 535 aaKnown RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SELENBP1Q13228 472 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 TOMM20Q15388 145 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 ZNF74Q16587 644 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 CTU2Q2VPK5 515 aaKnown RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 GLYR1Q49A26 553 aaPredicted RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SYT14P1Q58G82 188 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 C3orf33Q6P1S2 294 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 CD300LDQ6UXZ3 194 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 THSD4Q6ZMP0 1018 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 ZNF620Q6ZNG0 422 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 TMPRSS11FQ6ZWK6 438 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SIAH3Q8IW03 269 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 RNF113BQ8IZP6 322 aaKnown RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 FAM109AQ8N4B1 249 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 LINC00471Q8N535 108 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 OR14L1PQ8NHC6 308 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SMPDL3BQ92485 455 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SDCCAG3Q96C92 435 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 BPIFA2Q96DR5 249 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SGTBQ96EQ0 304 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SFXN2Q96NB2 322 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 GABARAPL3Q9BY60 117 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SLC19A3Q9BZV2 496 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 DEFB127Q9H1M4 99 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 RIBC2Q9H4K1 309 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 EGLN3Q9H6Z9 239 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 MCCC2Q9HCC0 563 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 PAPOLBQ9NRJ5 636 aaKnown RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 KRT84Q9NSB2 600 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SMPD3Q9NY59 655 aaPredicted RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SPRR3Q9UBC9 169 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 PLEKHB1Q9UF11 243 aaPredicted RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 PRDM4Q9UKN5 801 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 POFUT2Q9Y2G5 429 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 MRPS18CQ9Y3D5 142 aaKnown RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 SPENQ96T58 3664 aaKnown RBP7.22□□□□□ -1.25
PCDH9-205ENST00000614931 DOCK7Q96N67 2140 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 HECTD1Q9ULT8 2610 aa7.22□□□□□ -1.25
PCDH9-205ENST00000614931 TRAV36DV7A0A075B6V5 113 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 LIPT2A6NK58 231 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 EFCAB9A8MZ26 197 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 ZNF814B7Z6K7 855 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 H0YJX3 145 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 M0R129 80 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 RAMP1O60894 148 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 PTP4A3O75365 173 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 AHSA1O95433 338 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 CLIC3O95833 236 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 IGF2P01344 180 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 CRYABP02511 175 aaKnown RBP7.21□□□□□ -1.26
PCDH9-205ENST00000614931 STSP08842 583 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 ASAH2BP0C7U1 165 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 TFPIP10646 304 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 OSMP13725 252 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 GRPRP30550 384 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 UQCRC1P31930 480 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 LHX2P50458 406 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 ARHGDIAP52565 204 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 SUCLG1P53597 346 aaKnown RBP7.21□□□□□ -1.26
PCDH9-205ENST00000614931 CLDN20P56880 219 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 RPS4XP62701 263 aaKnown RBP7.21□□□□□ -1.26
PCDH9-205ENST00000614931 RAC1P63000 192 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 MYBPHQ13203 477 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 C3AR1Q16581 482 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 TMEM176BQ3YBM2 270 aaPredicted RBP7.21□□□□□ -1.26
PCDH9-205ENST00000614931 SLC36A3Q495N2 470 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 C4orf17Q53FE4 359 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 NHSL2Q5HYW2 709 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 C6orf52Q5T4I8 152 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 TMEM236Q5W0B7 351 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 RASSF6Q6ZTQ3 369 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 RRM2BQ7LG56 351 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 GGNQ86UU5 652 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 SLC22A16Q86VW1 577 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 CCDC71Q8IV32 467 aaPredicted RBP7.21□□□□□ -1.26
PCDH9-205ENST00000614931 PARP8Q8N3A8 854 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 IQCF1Q8N6M8 205 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 OR4Q3Q8NH05 313 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 OR51A7Q8NH64 312 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 MOSPD2Q8NHP6 518 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 FANK1Q8TC84 345 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 LIPHQ8WWY8 451 aa7.21□□□□□ -1.26
PCDH9-205ENST00000614931 ADGRG7Q96K78 797 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms